RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 USP5P45974 858 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 ANKRD18AQ8IVF6 992 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 RTEL1-TNFRSF6BF6WH68 1400 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 KCNH5Q8NCM2 988 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
TRPS1-201ENST00000220888 CCT4P50991 539 aaKnown RBP12.52□□□□□ -0.4
TRPS1-201ENST00000220888 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.4
TRPS1-201ENST00000220888 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.41
TRPS1-201ENST00000220888 AQRO60306 1485 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRPS1-201ENST00000220888 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
TRPS1-201ENST00000220888 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
TRPS1-201ENST00000220888 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
TRPS1-201ENST00000220888 CAVIN4Q5BKX8 364 aa12.51□□□□□ -0.41
TRPS1-201ENST00000220888 ABCF2Q9UG63 623 aa12.51□□□□□ -0.41
TRPS1-201ENST00000220888 RPGRQ92834 1020 aaKnown RBP12.51□□□□□ -0.41
TRPS1-201ENST00000220888 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
TRPS1-201ENST00000220888 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
TRPS1-201ENST00000220888 ERLIN2O94905 339 aa12.51□□□□□ -0.41
TRPS1-201ENST00000220888 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
TRPS1-201ENST00000220888 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
TRPS1-201ENST00000220888 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
TRPS1-201ENST00000220888 CTNNA3Q9UI47 895 aa12.51□□□□□ -0.41
TRPS1-201ENST00000220888 FMNL2Q96PY5 1086 aa12.5□□□□□ -0.41
TRPS1-201ENST00000220888 SMC2O95347 1197 aa12.5□□□□□ -0.41
TRPS1-201ENST00000220888 PRDM2Q13029 1718 aa12.5□□□□□ -0.41
TRPS1-201ENST00000220888 CNTLNQ9NXG0 1405 aa12.5□□□□□ -0.41
TRPS1-201ENST00000220888 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
TRPS1-201ENST00000220888 KIF7Q2M1P5 1343 aa12.5□□□□□ -0.41
TRPS1-201ENST00000220888 ANKRD62A6NC57 917 aa12.5□□□□□ -0.41
TRPS1-201ENST00000220888 CDKL5O76039 1030 aa12.5□□□□□ -0.41
TRPS1-201ENST00000220888 ERCC4Q92889 916 aaPredicted RBP12.5□□□□□ -0.41
TRPS1-201ENST00000220888 DEF6Q9H4E7 631 aa12.5□□□□□ -0.41
TRPS1-201ENST00000220888 IDH1O75874 414 aaKnown RBP12.49□□□□□ -0.41
TRPS1-201ENST00000220888 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
TRPS1-201ENST00000220888 SEPT7Q16181 437 aaKnown RBP12.49□□□□□ -0.41
TRPS1-201ENST00000220888 SEPT11Q9NVA2 429 aaKnown RBP12.49□□□□□ -0.41
TRPS1-201ENST00000220888 PTCD1O75127 700 aaKnown RBP12.49□□□□□ -0.41
TRPS1-201ENST00000220888 TXLNBQ8N3L3 684 aa12.49□□□□□ -0.41
TRPS1-201ENST00000220888 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
TRPS1-201ENST00000220888 ANKRD1Q15327 319 aa12.49□□□□□ -0.41
TRPS1-201ENST00000220888 FAM13BQ9NYF5 915 aa12.49□□□□□ -0.41
TRPS1-201ENST00000220888 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
TRPS1-201ENST00000220888 METTL24Q5JXM2 366 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
TRPS1-201ENST00000220888 DACH1Q9UI36 760 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 IFIT1P09914 478 aaKnown RBP12.48□□□□□ -0.41
TRPS1-201ENST00000220888 AIDAQ96BJ3 306 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 MCM2P49736 904 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 NEK4P51957 841 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 SKIDA1Q1XH10 827 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
TRPS1-201ENST00000220888 AACSQ86V21 672 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 LRRCC1Q9C099 1032 aa12.48□□□□□ -0.41
TRPS1-201ENST00000220888 SEC63Q9UGP8 760 aaKnown RBP12.48□□□□□ -0.41
TRPS1-201ENST00000220888 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
TRPS1-201ENST00000220888 CCDC181Q5TID7 509 aa12.47□□□□□ -0.41
TRPS1-201ENST00000220888 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
TRPS1-201ENST00000220888 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
TRPS1-201ENST00000220888 MKNK2Q9HBH9 465 aa12.47□□□□□ -0.41
TRPS1-201ENST00000220888 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
TRPS1-201ENST00000220888 EXOC5O00471 708 aa12.46□□□□□ -0.41
TRPS1-201ENST00000220888 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
TRPS1-201ENST00000220888 PIBF1Q8WXW3 757 aa12.46□□□□□ -0.41
TRPS1-201ENST00000220888 CCDC191Q8NCU4 936 aa12.46□□□□□ -0.41
TRPS1-201ENST00000220888 TRIM5Q9C035 493 aa12.46□□□□□ -0.41
TRPS1-201ENST00000220888 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.42
TRPS1-201ENST00000220888 STK3Q13188 491 aa12.46□□□□□ -0.42
TRPS1-201ENST00000220888 GRM1Q13255 1194 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 C6orf229H3BNL8 230 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 PPP1R12BO60237 982 aaPredicted RBP12.45□□□□□ -0.42
TRPS1-201ENST00000220888 ZNF771Q7L3S4 317 aaPredicted RBP12.45□□□□□ -0.42
TRPS1-201ENST00000220888 WASF1Q92558 559 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 CUL5Q93034 780 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 DRC1Q96MC2 740 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 AKAP2Q9Y2D5 859 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 GCC1Q96CN9 775 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 CCP110O43303 1012 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 FEZ1Q99689 392 aa12.45□□□□□ -0.42
TRPS1-201ENST00000220888 SRGAP3O43295 1099 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 EZRP15311 586 aaKnown RBP12.44□□□□□ -0.42
TRPS1-201ENST00000220888 HSP90AB3PQ58FF7 597 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 C1orf115Q9H7X2 142 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 GRIN2BQ13224 1484 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 SSR1P43307 286 aaKnown RBP12.44□□□□□ -0.42
TRPS1-201ENST00000220888 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 CUX1P39880 1505 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 EHMT1Q9H9B1 1298 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 ADAMTS8Q9UP79 889 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms