RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 PLCH1Q4KWH8 1693 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 LMO7Q8WWI1 1683 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 MTHFSP49914 203 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 CHRNA2Q15822 529 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 IP6K1Q92551 441 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 CFAP53Q96M91 514 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 C8orf37Q96NL8 207 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 COL18A1P39060 1754 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 NWD2Q9ULI1 1742 aa17.75■□□□□ 0.43
TIMP1-201ENST00000218388 FAM83GA6ND36 823 aa17.74■□□□□ 0.43
TIMP1-201ENST00000218388 HOXC9P31274 260 aa17.74■□□□□ 0.43
TIMP1-201ENST00000218388 NGLY1Q96IV0 654 aa17.74■□□□□ 0.43
TIMP1-201ENST00000218388 RGPD5Q99666 1765 aa17.72■□□□□ 0.43
TIMP1-201ENST00000218388 INSRP06213 1382 aa17.72■□□□□ 0.43
TIMP1-201ENST00000218388 SLIT2O94813 1529 aa17.72■□□□□ 0.43
TIMP1-201ENST00000218388 ADRA2BP18089 450 aa17.71■□□□□ 0.43
TIMP1-201ENST00000218388 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
TIMP1-201ENST00000218388 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.42
TIMP1-201ENST00000218388 CAMTA1Q9Y6Y1 1673 aa17.71■□□□□ 0.42
TIMP1-201ENST00000218388 EVA1CP58658 441 aa17.7■□□□□ 0.42
TIMP1-201ENST00000218388 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.69■□□□□ 0.42
TIMP1-201ENST00000218388 COL5A2P05997 1499 aaPredicted RBP17.69■□□□□ 0.42
TIMP1-201ENST00000218388 HSP90AB2PQ58FF8 381 aa17.69■□□□□ 0.42
TIMP1-201ENST00000218388 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
TIMP1-201ENST00000218388 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
TIMP1-201ENST00000218388 NRAPQ86VF7 1730 aa17.69■□□□□ 0.42
TIMP1-201ENST00000218388 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
TIMP1-201ENST00000218388 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
TIMP1-201ENST00000218388 ERBB3P21860 1342 aa17.68■□□□□ 0.42
TIMP1-201ENST00000218388 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
TIMP1-201ENST00000218388 UNC5CLQ8IV45 518 aa17.67■□□□□ 0.42
TIMP1-201ENST00000218388 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
TIMP1-201ENST00000218388 USP21Q9UK80 565 aa17.67■□□□□ 0.42
TIMP1-201ENST00000218388 AFF2P51816 1311 aa17.67■□□□□ 0.42
TIMP1-201ENST00000218388 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
TIMP1-201ENST00000218388 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
TIMP1-201ENST00000218388 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
TIMP1-201ENST00000218388 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
TIMP1-201ENST00000218388 EIF4A2Q14240 407 aaKnown RBP17.65■□□□□ 0.42
TIMP1-201ENST00000218388 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
TIMP1-201ENST00000218388 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
TIMP1-201ENST00000218388 CRB1P82279 1406 aa17.64■□□□□ 0.41
TIMP1-201ENST00000218388 TOM1L2Q6ZVM7 507 aa17.63■□□□□ 0.41
TIMP1-201ENST00000218388 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
TIMP1-201ENST00000218388 CCER2I3L3R5 266 aa17.62■□□□□ 0.41
TIMP1-201ENST00000218388 IL13P35225 146 aa17.62■□□□□ 0.41
TIMP1-201ENST00000218388 NLRP2Q9NX02 1062 aa17.62■□□□□ 0.41
TIMP1-201ENST00000218388 TRPC5Q9UL62 973 aaPredicted RBP17.62■□□□□ 0.41
TIMP1-201ENST00000218388 VPS72Q15906 364 aa17.61■□□□□ 0.41
TIMP1-201ENST00000218388 LARP1Q6PKG0 1096 aaKnown RBP17.61■□□□□ 0.41
TIMP1-201ENST00000218388 MIER1Q8N108 512 aa17.61■□□□□ 0.41
TIMP1-201ENST00000218388 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
TIMP1-201ENST00000218388 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
TIMP1-201ENST00000218388 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
TIMP1-201ENST00000218388 RGPD1P0DJD0 1748 aa17.59■□□□□ 0.41
TIMP1-201ENST00000218388 ATRNO75882 1429 aa17.59■□□□□ 0.41
TIMP1-201ENST00000218388 IGSF1Q8N6C5 1336 aa17.59■□□□□ 0.41
TIMP1-201ENST00000218388 U2SURPO15042 1029 aaKnown RBP17.59■□□□□ 0.41
TIMP1-201ENST00000218388 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
TIMP1-201ENST00000218388 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.4
TIMP1-201ENST00000218388 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.4
TIMP1-201ENST00000218388 EYA1Q99502 592 aa17.58■□□□□ 0.4
TIMP1-201ENST00000218388 SPATA31A1Q5TZJ5 1347 aa17.57■□□□□ 0.4
TIMP1-201ENST00000218388 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
TIMP1-201ENST00000218388 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
TIMP1-201ENST00000218388 QTRT2Q9H974 415 aaKnown RBP17.57■□□□□ 0.4
TIMP1-201ENST00000218388 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
TIMP1-201ENST00000218388 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
TIMP1-201ENST00000218388 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
TIMP1-201ENST00000218388 TCP11L2Q8N4U5 519 aa17.56■□□□□ 0.4
TIMP1-201ENST00000218388 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
TIMP1-201ENST00000218388 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
TIMP1-201ENST00000218388 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
TIMP1-201ENST00000218388 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
TIMP1-201ENST00000218388 CCDC184Q52MB2 194 aa17.54■□□□□ 0.4
TIMP1-201ENST00000218388 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
TIMP1-201ENST00000218388 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
TIMP1-201ENST00000218388 CDCA7Q9BWT1 371 aaPredicted RBP17.54■□□□□ 0.4
TIMP1-201ENST00000218388 PNNQ9H307 717 aaKnown RBP17.54■□□□□ 0.4
TIMP1-201ENST00000218388 KDRP35968 1356 aa17.53■□□□□ 0.4
TIMP1-201ENST00000218388 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
TIMP1-201ENST00000218388 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
TIMP1-201ENST00000218388 PLEKHG2Q9H7P9 1386 aa17.53■□□□□ 0.4
TIMP1-201ENST00000218388 NEFMP07197 916 aa17.52■□□□□ 0.4
TIMP1-201ENST00000218388 BARGINQ6ZT62 677 aa17.52■□□□□ 0.4
TIMP1-201ENST00000218388 GLI3P10071 1580 aa17.52■□□□□ 0.39
TIMP1-201ENST00000218388 FCHSD2O94868 740 aa17.51■□□□□ 0.39
TIMP1-201ENST00000218388 HMOX1P09601 288 aa17.51■□□□□ 0.39
TIMP1-201ENST00000218388 IL2RBP14784 551 aa17.51■□□□□ 0.39
TIMP1-201ENST00000218388 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
TIMP1-201ENST00000218388 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
TIMP1-201ENST00000218388 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
TIMP1-201ENST00000218388 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
TIMP1-201ENST00000218388 RXRBP28702 533 aa17.49■□□□□ 0.39
TIMP1-201ENST00000218388 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
TIMP1-201ENST00000218388 RGS17Q9UGC6 210 aaPredicted RBP17.49■□□□□ 0.39
TIMP1-201ENST00000218388 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
TIMP1-201ENST00000218388 MEGF6O75095 1541 aa17.48■□□□□ 0.39
TIMP1-201ENST00000218388 A0A0G2JS52 829 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms