RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 RGPD5Q99666 1765 aa28.17■■■□□ 2.1
SYNGR1-201ENST00000216155 TOM1L2Q6ZVM7 507 aa28.17■■■□□ 2.1
SYNGR1-201ENST00000216155 WDR17Q8IZU2 1322 aa28.17■■■□□ 2.1
SYNGR1-201ENST00000216155 SBF2Q86WG5 1849 aa28.16■■■□□ 2.1
SYNGR1-201ENST00000216155 TTC21AQ8NDW8 1320 aa28.16■■■□□ 2.1
SYNGR1-201ENST00000216155 SBNO2Q9Y2G9 1366 aa28.15■■■□□ 2.1
SYNGR1-201ENST00000216155 RGPD3A6NKT7 1758 aaPredicted RBP28.15■■■□□ 2.1
SYNGR1-201ENST00000216155 RGPD4Q7Z3J3 1758 aa28.15■■■□□ 2.1
SYNGR1-201ENST00000216155 ARHGEF25Q86VW2 580 aa28.15■■■□□ 2.1
SYNGR1-201ENST00000216155 KCNH5Q8NCM2 988 aa28.14■■■□□ 2.1
SYNGR1-201ENST00000216155 KTN1Q86UP2 1357 aaKnown RBP28.13■■■□□ 2.09
SYNGR1-201ENST00000216155 C11orf95C9JLR9 678 aaPredicted RBP28.13■■■□□ 2.09
SYNGR1-201ENST00000216155 SOX12O15370 315 aa28.12■■■□□ 2.09
SYNGR1-201ENST00000216155 DDB1Q16531 1140 aa28.12■■■□□ 2.09
SYNGR1-201ENST00000216155 USP54Q70EL1 1684 aa28.11■■■□□ 2.09
SYNGR1-201ENST00000216155 ABCC6O95255 1503 aa28.11■■■□□ 2.09
SYNGR1-201ENST00000216155 CD163L1Q9NR16 1453 aa28.08■■■□□ 2.09
SYNGR1-201ENST00000216155 NBPF14Q5TI25 921 aa28.08■■■□□ 2.09
SYNGR1-201ENST00000216155 CARD10Q9BWT7 1032 aa28.06■■■□□ 2.08
SYNGR1-201ENST00000216155 BCL9O00512 1426 aa28.06■■■□□ 2.08
SYNGR1-201ENST00000216155 CDCA7Q9BWT1 371 aaPredicted RBP28.05■■■□□ 2.08
SYNGR1-201ENST00000216155 CARD11Q9BXL7 1154 aa28.05■■■□□ 2.08
SYNGR1-201ENST00000216155 USP31Q70CQ4 1352 aa28.04■■■□□ 2.08
SYNGR1-201ENST00000216155 CSB-PGBD3P0DP91 1061 aa28.04■■■□□ 2.08
SYNGR1-201ENST00000216155 PTF1AQ7RTS3 328 aa28.04■■■□□ 2.08
SYNGR1-201ENST00000216155 MARCH10Q8NA82 808 aaPredicted RBP28.04■■■□□ 2.08
SYNGR1-201ENST00000216155 PLSCR1O15162 318 aa28.02■■■□□ 2.08
SYNGR1-201ENST00000216155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.02■■■□□ 2.08
SYNGR1-201ENST00000216155 BCL11BQ9C0K0 894 aaPredicted RBP28.02■■■□□ 2.08
SYNGR1-201ENST00000216155 LTN1O94822 1766 aa28.01■■■□□ 2.07
SYNGR1-201ENST00000216155 TNS2Q63HR2 1409 aa28.01■■■□□ 2.07
SYNGR1-201ENST00000216155 CCDC7Q96M83 1385 aa28■■■□□ 2.07
SYNGR1-201ENST00000216155 NME9Q86XW9 330 aa27.99■■■□□ 2.07
SYNGR1-201ENST00000216155 ANO8Q9HCE9 1232 aaPredicted RBP27.98■■■□□ 2.07
SYNGR1-201ENST00000216155 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
SYNGR1-201ENST00000216155 CASZ1Q86V15 1759 aa27.97■■■□□ 2.07
SYNGR1-201ENST00000216155 ERBB3P21860 1342 aa27.96■■■□□ 2.07
SYNGR1-201ENST00000216155 EDC4Q6P2E9 1401 aaKnown RBP27.96■■■□□ 2.07
SYNGR1-201ENST00000216155 TMC1Q8TDI8 760 aa27.96■■■□□ 2.07
SYNGR1-201ENST00000216155 SLC12A5Q9H2X9 1139 aa27.95■■■□□ 2.06
SYNGR1-201ENST00000216155 A0A1W2PP64 1363 aa27.95■■■□□ 2.06
SYNGR1-201ENST00000216155 EXOC5O00471 708 aa27.93■■■□□ 2.06
SYNGR1-201ENST00000216155 HDGFL2Q7Z4V5 671 aaPredicted RBP27.93■■■□□ 2.06
SYNGR1-201ENST00000216155 PROM2Q8N271 834 aa27.93■■■□□ 2.06
SYNGR1-201ENST00000216155 SPON1Q9HCB6 807 aa27.93■■■□□ 2.06
SYNGR1-201ENST00000216155 NHSQ6T4R5 1651 aa27.93■■■□□ 2.06
SYNGR1-201ENST00000216155 KCNQ2O43526 872 aa27.92■■■□□ 2.06
SYNGR1-201ENST00000216155 NLRP2Q9NX02 1062 aa27.88■■■□□ 2.05
SYNGR1-201ENST00000216155 TERF2IPQ9NYB0 399 aa27.88■■■□□ 2.05
SYNGR1-201ENST00000216155 PUS7Q96PZ0 661 aaKnown RBP27.87■■■□□ 2.05
SYNGR1-201ENST00000216155 PPP1R1BQ9UD71 204 aaPredicted RBP27.87■■■□□ 2.05
SYNGR1-201ENST00000216155 ANKRD24Q8TF21 1146 aa27.86■■■□□ 2.05
SYNGR1-201ENST00000216155 PDGFDQ9GZP0 370 aaPredicted RBP27.86■■■□□ 2.05
SYNGR1-201ENST00000216155 NINLQ9Y2I6 1382 aa27.86■■■□□ 2.05
SYNGR1-201ENST00000216155 TXNRD1Q16881 649 aa27.85■■■□□ 2.05
SYNGR1-201ENST00000216155 TESK2Q96S53 571 aa27.85■■■□□ 2.05
SYNGR1-201ENST00000216155 IL2RBP14784 551 aa27.84■■■□□ 2.05
SYNGR1-201ENST00000216155 FAM208AQ9UK61 1670 aaKnown RBP27.83■■■□□ 2.05
SYNGR1-201ENST00000216155 ACSBG1Q96GR2 724 aa27.81■■■□□ 2.04
SYNGR1-201ENST00000216155 PAPPAQ13219 1627 aa27.81■■■□□ 2.04
SYNGR1-201ENST00000216155 MYOM1P52179 1685 aa27.81■■■□□ 2.04
SYNGR1-201ENST00000216155 BTAF1O14981 1849 aa27.81■■■□□ 2.04
SYNGR1-201ENST00000216155 ST20-MTHFSA0A0A6YYL1 179 aa27.8■■■□□ 2.04
SYNGR1-201ENST00000216155 STK32BQ9NY57 414 aa27.79■■■□□ 2.04
SYNGR1-201ENST00000216155 ZBTB7AO95365 584 aa27.78■■■□□ 2.04
SYNGR1-201ENST00000216155 SLC15A2Q16348 729 aa27.77■■■□□ 2.04
SYNGR1-201ENST00000216155 IP6K1Q92551 441 aa27.77■■■□□ 2.04
SYNGR1-201ENST00000216155 PTGER2P43116 358 aa27.74■■■□□ 2.03
SYNGR1-201ENST00000216155 ANKRD36BQ8N2N9 1353 aa27.73■■■□□ 2.03
SYNGR1-201ENST00000216155 MAP3K19Q56UN5 1328 aa27.72■■■□□ 2.03
SYNGR1-201ENST00000216155 LTV1Q96GA3 475 aaPredicted RBP27.72■■■□□ 2.03
SYNGR1-201ENST00000216155 COG3Q96JB2 828 aa27.72■■■□□ 2.03
SYNGR1-201ENST00000216155 YY1P25490 414 aa27.71■■■□□ 2.03
SYNGR1-201ENST00000216155 ATF5Q9Y2D1 282 aaPredicted RBP27.7■■■□□ 2.02
SYNGR1-201ENST00000216155 RGPD2P0DJD1 1756 aa27.7■■■□□ 2.02
SYNGR1-201ENST00000216155 SHANK3Q9BYB0 1731 aa27.7■■■□□ 2.02
SYNGR1-201ENST00000216155 SLC24A1O60721 1099 aa27.69■■■□□ 2.02
SYNGR1-201ENST00000216155 FBLN1P23142 703 aa27.69■■■□□ 2.02
SYNGR1-201ENST00000216155 HOXC9P31274 260 aa27.69■■■□□ 2.02
SYNGR1-201ENST00000216155 UTRNP46939 3433 aa27.69■■■□□ 2.02
SYNGR1-201ENST00000216155 KAT6BQ8WYB5 2073 aa27.69■■■□□ 2.02
SYNGR1-201ENST00000216155 DOT1LQ8TEK3 1739 aa27.67■■■□□ 2.02
SYNGR1-201ENST00000216155 MTFR1LQ9H019 292 aa27.67■■■□□ 2.02
SYNGR1-201ENST00000216155 USP47Q96K76 1375 aa27.67■■■□□ 2.02
SYNGR1-201ENST00000216155 DDX54Q8TDD1 881 aaKnown RBP27.66■■■□□ 2.02
SYNGR1-201ENST00000216155 MEGF6O75095 1541 aa27.66■■■□□ 2.02
SYNGR1-201ENST00000216155 RTL1A6NKG5 1358 aa27.65■■■□□ 2.02
SYNGR1-201ENST00000216155 ZNF827Q17R98 1081 aa27.65■■■□□ 2.02
SYNGR1-201ENST00000216155 SGIP1Q9BQI5 828 aa27.65■■■□□ 2.02
SYNGR1-201ENST00000216155 LRRC4BQ9NT99 713 aa27.65■■■□□ 2.02
SYNGR1-201ENST00000216155 DCAF8L1A6NGE4 600 aa27.64■■■□□ 2.02
SYNGR1-201ENST00000216155 AMPHP49418 695 aa27.64■■■□□ 2.02
SYNGR1-201ENST00000216155 QSER1Q2KHR3 1735 aa27.61■■■□□ 2.01
SYNGR1-201ENST00000216155 TMF1P82094 1093 aa27.61■■■□□ 2.01
SYNGR1-201ENST00000216155 RRS1Q15050 365 aaKnown RBP27.61■■■□□ 2.01
SYNGR1-201ENST00000216155 FHDC1Q9C0D6 1143 aaPredicted RBP27.61■■■□□ 2.01
SYNGR1-201ENST00000216155 KIF20BQ96Q89 1820 aa27.61■■■□□ 2.01
SYNGR1-201ENST00000216155 NSD2O96028 1365 aa27.6■■■□□ 2.01
SYNGR1-201ENST00000216155 FYB1O15117 783 aa27.59■■■□□ 2.01
SYNGR1-201ENST00000216155 GGNBP2Q9H3C7 697 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms