RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 AFF2P51816 1311 aa27.29■■□□□ 1.96
RHBDD3-201ENST00000216085 ANP32CO43423 234 aa27.29■■□□□ 1.96
RHBDD3-201ENST00000216085 IP6K1Q92551 441 aa27.29■■□□□ 1.96
RHBDD3-201ENST00000216085 POLKQ9UBT6 870 aa27.29■■□□□ 1.96
RHBDD3-201ENST00000216085 LMO7Q8WWI1 1683 aa27.28■■□□□ 1.96
RHBDD3-201ENST00000216085 EMILIN1Q9Y6C2 1016 aa27.28■■□□□ 1.96
RHBDD3-201ENST00000216085 SMG6Q86US8 1419 aaKnown RBP27.28■■□□□ 1.96
RHBDD3-201ENST00000216085 HOXC9P31274 260 aa27.27■■□□□ 1.96
RHBDD3-201ENST00000216085 USP21Q9UK80 565 aa27.27■■□□□ 1.96
RHBDD3-201ENST00000216085 EVA1CP58658 441 aa27.26■■□□□ 1.95
RHBDD3-201ENST00000216085 ZNF772Q68DY9 489 aaPredicted RBP27.26■■□□□ 1.95
RHBDD3-201ENST00000216085 COL18A1P39060 1754 aa27.25■■□□□ 1.95
RHBDD3-201ENST00000216085 CDK12Q9NYV4 1490 aaPredicted RBP27.25■■□□□ 1.95
RHBDD3-201ENST00000216085 UNC5CLQ8IV45 518 aa27.25■■□□□ 1.95
RHBDD3-201ENST00000216085 PRKRIP1Q9H875 184 aaPredicted RBP27.25■■□□□ 1.95
RHBDD3-201ENST00000216085 CAMTA1Q9Y6Y1 1673 aa27.24■■□□□ 1.95
RHBDD3-201ENST00000216085 PPP2R1AP30153 589 aa27.23■■□□□ 1.95
RHBDD3-201ENST00000216085 INSRP06213 1382 aa27.23■■□□□ 1.95
RHBDD3-201ENST00000216085 COL5A2P05997 1499 aaPredicted RBP27.23■■□□□ 1.95
RHBDD3-201ENST00000216085 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.23■■□□□ 1.95
RHBDD3-201ENST00000216085 MTHFSP49914 203 aa27.22■■□□□ 1.95
RHBDD3-201ENST00000216085 STRN4Q9NRL3 753 aa27.22■■□□□ 1.95
RHBDD3-201ENST00000216085 PEAK1Q9H792 1746 aa27.22■■□□□ 1.95
RHBDD3-201ENST00000216085 MYBBP1AQ9BQG0 1328 aaKnown RBP27.22■■□□□ 1.95
RHBDD3-201ENST00000216085 CSB-PGBD3P0DP91 1061 aa27.22■■□□□ 1.95
RHBDD3-201ENST00000216085 AXIN2Q9Y2T1 843 aa27.22■■□□□ 1.95
RHBDD3-201ENST00000216085 NRAPQ86VF7 1730 aa27.21■■□□□ 1.95
RHBDD3-201ENST00000216085 CFAP53Q96M91 514 aa27.21■■□□□ 1.95
RHBDD3-201ENST00000216085 BCL9LQ86UU0 1499 aa27.21■■□□□ 1.95
RHBDD3-201ENST00000216085 ANKRD24Q8TF21 1146 aa27.2■■□□□ 1.94
RHBDD3-201ENST00000216085 ERBB3P21860 1342 aa27.19■■□□□ 1.94
RHBDD3-201ENST00000216085 HSP90AB2PQ58FF8 381 aa27.19■■□□□ 1.94
RHBDD3-201ENST00000216085 TRPC5Q9UL62 973 aaPredicted RBP27.19■■□□□ 1.94
RHBDD3-201ENST00000216085 DIEXFQ68CQ4 756 aaKnown RBP27.18■■□□□ 1.94
RHBDD3-201ENST00000216085 WDR17Q8IZU2 1322 aa27.18■■□□□ 1.94
RHBDD3-201ENST00000216085 RGPD5Q99666 1765 aa27.18■■□□□ 1.94
RHBDD3-201ENST00000216085 LTV1Q96GA3 475 aaPredicted RBP27.17■■□□□ 1.94
RHBDD3-201ENST00000216085 CCDC9Q9Y3X0 531 aaKnown RBP27.17■■□□□ 1.94
RHBDD3-201ENST00000216085 VPS72Q15906 364 aa27.16■■□□□ 1.94
RHBDD3-201ENST00000216085 TOM1L2Q6ZVM7 507 aa27.16■■□□□ 1.94
RHBDD3-201ENST00000216085 FAM208AQ9UK61 1670 aaKnown RBP27.16■■□□□ 1.94
RHBDD3-201ENST00000216085 CRB1P82279 1406 aa27.15■■□□□ 1.94
RHBDD3-201ENST00000216085 LARP1Q6PKG0 1096 aaKnown RBP27.13■■□□□ 1.93
RHBDD3-201ENST00000216085 QTRT2Q9H974 415 aaKnown RBP27.13■■□□□ 1.93
RHBDD3-201ENST00000216085 ATRNO75882 1429 aa27.13■■□□□ 1.93
RHBDD3-201ENST00000216085 NLRP2Q9NX02 1062 aa27.12■■□□□ 1.93
RHBDD3-201ENST00000216085 DIAPH1O60610 1272 aaKnown RBP27.1■■□□□ 1.93
RHBDD3-201ENST00000216085 EIF4A2Q14240 407 aaKnown RBP27.09■■□□□ 1.93
RHBDD3-201ENST00000216085 SPATA31A5Q5VU36 1347 aa27.09■■□□□ 1.93
RHBDD3-201ENST00000216085 SPATA31A7Q8IWB4 1347 aa27.09■■□□□ 1.93
RHBDD3-201ENST00000216085 CARD10Q9BWT7 1032 aa27.09■■□□□ 1.93
RHBDD3-201ENST00000216085 GJD4Q96KN9 370 aaPredicted RBP27.08■■□□□ 1.93
RHBDD3-201ENST00000216085 SPATA31A1Q5TZJ5 1347 aa27.07■■□□□ 1.92
RHBDD3-201ENST00000216085 USP35Q9P2H5 1018 aa27.07■■□□□ 1.92
RHBDD3-201ENST00000216085 NUDCQ9Y266 331 aa27.07■■□□□ 1.92
RHBDD3-201ENST00000216085 THRAP3Q9Y2W1 955 aaKnown RBP27.07■■□□□ 1.92
RHBDD3-201ENST00000216085 COL3A1P02461 1466 aaPredicted RBP27.06■■□□□ 1.92
RHBDD3-201ENST00000216085 TCP11L2Q8N4U5 519 aa27.06■■□□□ 1.92
RHBDD3-201ENST00000216085 RGS17Q9UGC6 210 aaPredicted RBP27.06■■□□□ 1.92
RHBDD3-201ENST00000216085 RBM6P78332 1123 aaKnown RBP27.05■■□□□ 1.92
RHBDD3-201ENST00000216085 IL13P35225 146 aa27.04■■□□□ 1.92
RHBDD3-201ENST00000216085 RXRBP28702 533 aa27.02■■□□□ 1.92
RHBDD3-201ENST00000216085 NBPF6Q5VWK0 638 aa27.02■■□□□ 1.92
RHBDD3-201ENST00000216085 NBPF4Q96M43 638 aa27.02■■□□□ 1.92
RHBDD3-201ENST00000216085 EYA1Q99502 592 aa27.01■■□□□ 1.91
RHBDD3-201ENST00000216085 U2SURPO15042 1029 aaKnown RBP27■■□□□ 1.91
RHBDD3-201ENST00000216085 BARGINQ6ZT62 677 aa27■■□□□ 1.91
RHBDD3-201ENST00000216085 CDCA7Q9BWT1 371 aaPredicted RBP27■■□□□ 1.91
RHBDD3-201ENST00000216085 GLI3P10071 1580 aa27■■□□□ 1.91
RHBDD3-201ENST00000216085 IGSF1Q8N6C5 1336 aa27■■□□□ 1.91
RHBDD3-201ENST00000216085 POTEAQ6S8J7 498 aa26.99■■□□□ 1.91
RHBDD3-201ENST00000216085 RGPD2P0DJD1 1756 aa26.98■■□□□ 1.91
RHBDD3-201ENST00000216085 A0A0G2JS52 829 aa26.98■■□□□ 1.91
RHBDD3-201ENST00000216085 MYT1Q01538 1121 aa26.98■■□□□ 1.91
RHBDD3-201ENST00000216085 FAM98CQ17RN3 349 aaKnown RBP26.97■■□□□ 1.91
RHBDD3-201ENST00000216085 USHBP1Q8N6Y0 703 aa26.97■■□□□ 1.91
RHBDD3-201ENST00000216085 RAPGEF4Q8WZA2 1011 aa26.97■■□□□ 1.91
RHBDD3-201ENST00000216085 NCAPD2Q15021 1401 aa26.96■■□□□ 1.91
RHBDD3-201ENST00000216085 RGPD1P0DJD0 1748 aa26.96■■□□□ 1.91
RHBDD3-201ENST00000216085 IL2RBP14784 551 aa26.96■■□□□ 1.91
RHBDD3-201ENST00000216085 MRS2Q9HD23 443 aa26.95■■□□□ 1.9
RHBDD3-201ENST00000216085 WDR43Q15061 677 aaKnown RBP eCLIP26.94■■□□□ 1.9
RHBDD3-201ENST00000216085 U2AF1L5P0DN76 240 aaPredicted RBP26.94■■□□□ 1.9
RHBDD3-201ENST00000216085 U2AF1Q01081 240 aaKnown RBP eCLIP26.94■■□□□ 1.9
RHBDD3-201ENST00000216085 SULT6B1Q6IMI4 303 aa26.94■■□□□ 1.9
RHBDD3-201ENST00000216085 WNK3Q9BYP7 1800 aa26.93■■□□□ 1.9
RHBDD3-201ENST00000216085 TATP17735 454 aaPredicted RBP26.92■■□□□ 1.9
RHBDD3-201ENST00000216085 KDRP35968 1356 aa26.92■■□□□ 1.9
RHBDD3-201ENST00000216085 PLEKHG2Q9H7P9 1386 aa26.91■■□□□ 1.9
RHBDD3-201ENST00000216085 ONECUT3O60422 494 aaPredicted RBP26.91■■□□□ 1.9
RHBDD3-201ENST00000216085 PARP4Q9UKK3 1724 aaKnown RBP26.91■■□□□ 1.9
RHBDD3-201ENST00000216085 DISP2A7MBM2 1401 aa26.9■■□□□ 1.9
RHBDD3-201ENST00000216085 CCER2I3L3R5 266 aa26.89■■□□□ 1.9
RHBDD3-201ENST00000216085 HMOX1P09601 288 aa26.89■■□□□ 1.9
RHBDD3-201ENST00000216085 THSD7AQ9UPZ6 1657 aa26.89■■□□□ 1.9
RHBDD3-201ENST00000216085 PNNQ9H307 717 aaKnown RBP26.89■■□□□ 1.89
RHBDD3-201ENST00000216085 AEBP1Q8IUX7 1158 aa26.88■■□□□ 1.89
RHBDD3-201ENST00000216085 SEPT12Q8IYM1 358 aa26.88■■□□□ 1.89
RHBDD3-201ENST00000216085 MEGF6O75095 1541 aa26.87■■□□□ 1.89
RHBDD3-201ENST00000216085 NEFMP07197 916 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms