RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 NUDCQ9Y266 331 aa22.15■■□□□ 1.14
POLR2E-201ENST00000215587 DIAPH1O60610 1272 aaKnown RBP22.13■■□□□ 1.13
POLR2E-201ENST00000215587 HAP1P54257 671 aaPredicted RBP22.13■■□□□ 1.13
POLR2E-201ENST00000215587 PEAK1Q9H792 1746 aa22.12■■□□□ 1.13
POLR2E-201ENST00000215587 CRYBG1Q9Y4K1 1723 aa22.12■■□□□ 1.13
POLR2E-201ENST00000215587 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
POLR2E-201ENST00000215587 ZBTB7CA1YPR0 619 aa22.11■■□□□ 1.13
POLR2E-201ENST00000215587 CABLES1Q8TDN4 633 aa22.11■■□□□ 1.13
POLR2E-201ENST00000215587 ARHGEF25Q86VW2 580 aa22.1■■□□□ 1.13
POLR2E-201ENST00000215587 LTN1O94822 1766 aa22.1■■□□□ 1.13
POLR2E-201ENST00000215587 AFF2P51816 1311 aa22.09■■□□□ 1.13
POLR2E-201ENST00000215587 HOXC9P31274 260 aa22.09■■□□□ 1.13
POLR2E-201ENST00000215587 U2SURPO15042 1029 aaKnown RBP22.08■■□□□ 1.13
POLR2E-201ENST00000215587 ZC3H6P61129 1189 aaKnown RBP22.08■■□□□ 1.13
POLR2E-201ENST00000215587 IP6K1Q92551 441 aa22.08■■□□□ 1.13
POLR2E-201ENST00000215587 ABCA3Q99758 1704 aa22.08■■□□□ 1.12
POLR2E-201ENST00000215587 RGS12O14924 1447 aa22.07■■□□□ 1.12
POLR2E-201ENST00000215587 COL22A1Q8NFW1 1626 aaPredicted RBP22.07■■□□□ 1.12
POLR2E-201ENST00000215587 HSP90AB2PQ58FF8 381 aa22.07■■□□□ 1.12
POLR2E-201ENST00000215587 ADAMTS8Q9UP79 889 aa22.07■■□□□ 1.12
POLR2E-201ENST00000215587 CPDO75976 1380 aa22.07■■□□□ 1.12
POLR2E-201ENST00000215587 NUTM2BA6NNL0 878 aaPredicted RBP22.06■■□□□ 1.12
POLR2E-201ENST00000215587 NUTM2EB1AL46 878 aaPredicted RBP22.06■■□□□ 1.12
POLR2E-201ENST00000215587 U2AF1L5P0DN76 240 aaPredicted RBP22.06■■□□□ 1.12
POLR2E-201ENST00000215587 U2AF1Q01081 240 aaKnown RBP eCLIP22.06■■□□□ 1.12
POLR2E-201ENST00000215587 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
POLR2E-201ENST00000215587 IL13P35225 146 aa22.05■■□□□ 1.12
POLR2E-201ENST00000215587 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
POLR2E-201ENST00000215587 ABCC6O95255 1503 aa22.05■■□□□ 1.12
POLR2E-201ENST00000215587 BLMP54132 1417 aaPredicted RBP22.05■■□□□ 1.12
POLR2E-201ENST00000215587 KIAA0232Q92628 1395 aa22.03■■□□□ 1.12
POLR2E-201ENST00000215587 RBM6P78332 1123 aaKnown RBP22.03■■□□□ 1.12
POLR2E-201ENST00000215587 HNRNPUQ00839 825 aaKnown RBP eCLIP22.02■■□□□ 1.12
POLR2E-201ENST00000215587 PRDM11Q9NQV5 511 aa22.02■■□□□ 1.12
POLR2E-201ENST00000215587 PNNQ9H307 717 aaKnown RBP22■■□□□ 1.11
POLR2E-201ENST00000215587 LTV1Q96GA3 475 aaPredicted RBP21.99■■□□□ 1.11
POLR2E-201ENST00000215587 QTRT2Q9H974 415 aaKnown RBP21.99■■□□□ 1.11
POLR2E-201ENST00000215587 CHRNA2Q15822 529 aa21.98■■□□□ 1.11
POLR2E-201ENST00000215587 CCDC146Q8IYE0 955 aa21.97■■□□□ 1.11
POLR2E-201ENST00000215587 FCHSD2O94868 740 aa21.96■■□□□ 1.11
POLR2E-201ENST00000215587 ANKRD24Q8TF21 1146 aa21.96■■□□□ 1.11
POLR2E-201ENST00000215587 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
POLR2E-201ENST00000215587 C8orf37Q96NL8 207 aa21.96■■□□□ 1.11
POLR2E-201ENST00000215587 COL18A1P39060 1754 aa21.96■■□□□ 1.11
POLR2E-201ENST00000215587 RGPD1P0DJD0 1748 aa21.95■■□□□ 1.1
POLR2E-201ENST00000215587 NEFMP07197 916 aa21.95■■□□□ 1.1
POLR2E-201ENST00000215587 AXIN2Q9Y2T1 843 aa21.95■■□□□ 1.1
POLR2E-201ENST00000215587 IGSF1Q8N6C5 1336 aa21.95■■□□□ 1.1
POLR2E-201ENST00000215587 HMOX1P09601 288 aa21.94■■□□□ 1.1
POLR2E-201ENST00000215587 NGLY1Q96IV0 654 aa21.94■■□□□ 1.1
POLR2E-201ENST00000215587 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
POLR2E-201ENST00000215587 ERBB3P21860 1342 aa21.93■■□□□ 1.1
POLR2E-201ENST00000215587 EYA1Q99502 592 aa21.93■■□□□ 1.1
POLR2E-201ENST00000215587 RSPH6AQ9H0K4 717 aa21.93■■□□□ 1.1
POLR2E-201ENST00000215587 LMO7Q8WWI1 1683 aa21.92■■□□□ 1.1
POLR2E-201ENST00000215587 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
POLR2E-201ENST00000215587 SULT6B1Q6IMI4 303 aa21.92■■□□□ 1.1
POLR2E-201ENST00000215587 COL14A1Q05707 1796 aaKnown RBP21.92■■□□□ 1.1
POLR2E-201ENST00000215587 CSB-PGBD3P0DP91 1061 aa21.91■■□□□ 1.1
POLR2E-201ENST00000215587 FAM83GA6ND36 823 aa21.9■■□□□ 1.1
POLR2E-201ENST00000215587 RGPD5Q99666 1765 aa21.89■■□□□ 1.1
POLR2E-201ENST00000215587 KDRP35968 1356 aa21.89■■□□□ 1.1
POLR2E-201ENST00000215587 FAM208AQ9UK61 1670 aaKnown RBP21.89■■□□□ 1.1
POLR2E-201ENST00000215587 CAMTA1Q9Y6Y1 1673 aa21.89■■□□□ 1.1
POLR2E-201ENST00000215587 ZBED9Q6R2W3 1325 aa21.89■■□□□ 1.1
POLR2E-201ENST00000215587 APAF1O14727 1248 aa21.89■■□□□ 1.09
POLR2E-201ENST00000215587 ADAMTS2O95450 1211 aa21.89■■□□□ 1.09
POLR2E-201ENST00000215587 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.09
POLR2E-201ENST00000215587 NGEFQ8N5V2 710 aa21.89■■□□□ 1.09
POLR2E-201ENST00000215587 PLEKHF1Q96S99 279 aa21.89■■□□□ 1.09
POLR2E-201ENST00000215587 EP400Q96L91 3159 aa21.89■■□□□ 1.09
POLR2E-201ENST00000215587 NBPF6Q5VWK0 638 aa21.87■■□□□ 1.09
POLR2E-201ENST00000215587 TCP11L2Q8N4U5 519 aa21.87■■□□□ 1.09
POLR2E-201ENST00000215587 NBPF4Q96M43 638 aa21.87■■□□□ 1.09
POLR2E-201ENST00000215587 NLRP2Q9NX02 1062 aa21.87■■□□□ 1.09
POLR2E-201ENST00000215587 COL5A2P05997 1499 aaPredicted RBP21.87■■□□□ 1.09
POLR2E-201ENST00000215587 SENP3-EIF4A1A0A087X0R7 540 aa21.86■■□□□ 1.09
POLR2E-201ENST00000215587 USHBP1Q8N6Y0 703 aa21.86■■□□□ 1.09
POLR2E-201ENST00000215587 WDR17Q8IZU2 1322 aa21.85■■□□□ 1.09
POLR2E-201ENST00000215587 EVA1CP58658 441 aa21.85■■□□□ 1.09
POLR2E-201ENST00000215587 NCAPD2Q15021 1401 aa21.85■■□□□ 1.09
POLR2E-201ENST00000215587 CENPBP07199 599 aaPredicted RBP21.84■■□□□ 1.09
POLR2E-201ENST00000215587 BTG4Q9NY30 223 aa21.84■■□□□ 1.09
POLR2E-201ENST00000215587 SALL2Q9Y467 1007 aaPredicted RBP21.84■■□□□ 1.09
POLR2E-201ENST00000215587 STRN4Q9NRL3 753 aa21.83■■□□□ 1.09
POLR2E-201ENST00000215587 PLCH1Q4KWH8 1693 aa21.82■■□□□ 1.08
POLR2E-201ENST00000215587 RGPD2P0DJD1 1756 aa21.82■■□□□ 1.08
POLR2E-201ENST00000215587 TOM1L2Q6ZVM7 507 aa21.82■■□□□ 1.08
POLR2E-201ENST00000215587 CCDC125Q86Z20 511 aa21.82■■□□□ 1.08
POLR2E-201ENST00000215587 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
POLR2E-201ENST00000215587 NFE2L2Q16236 605 aa21.81■■□□□ 1.08
POLR2E-201ENST00000215587 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
POLR2E-201ENST00000215587 PHACTR3Q96KR7 559 aa21.81■■□□□ 1.08
POLR2E-201ENST00000215587 RRP7AQ9Y3A4 280 aaKnown RBP21.81■■□□□ 1.08
POLR2E-201ENST00000215587 NEUROD2Q15784 382 aa21.8■■□□□ 1.08
POLR2E-201ENST00000215587 TRPC5Q9UL62 973 aaPredicted RBP21.8■■□□□ 1.08
POLR2E-201ENST00000215587 USP21Q9UK80 565 aa21.79■■□□□ 1.08
POLR2E-201ENST00000215587 CRB1P82279 1406 aa21.79■■□□□ 1.08
POLR2E-201ENST00000215587 LARP1Q6PKG0 1096 aaKnown RBP21.78■■□□□ 1.08
POLR2E-201ENST00000215587 RAPGEF4Q8WZA2 1011 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms