RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 FILIP1Q7Z7B0 1213 aa18.83■□□□□ 0.61
RB1CC1-201ENST00000025008 DNAJC2Q99543 621 aaKnown RBP18.83■□□□□ 0.6
RB1CC1-201ENST00000025008 UPF3BQ9BZI7 483 aaKnown RBP18.82■□□□□ 0.6
RB1CC1-201ENST00000025008 CCDC181Q5TID7 509 aa18.82■□□□□ 0.6
RB1CC1-201ENST00000025008 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
RB1CC1-201ENST00000025008 ERICH4A6NGS2 130 aa18.82■□□□□ 0.6
RB1CC1-201ENST00000025008 GBP3Q9H0R5 595 aa18.81■□□□□ 0.6
RB1CC1-201ENST00000025008 SMTNL1A8MU46 457 aa18.81■□□□□ 0.6
RB1CC1-201ENST00000025008 MCM5P33992 734 aa18.81■□□□□ 0.6
RB1CC1-201ENST00000025008 BLOC1S2Q6QNY1 142 aa18.81■□□□□ 0.6
RB1CC1-201ENST00000025008 SLFN5Q08AF3 891 aa18.81■□□□□ 0.6
RB1CC1-201ENST00000025008 RPAP2Q8IXW5 612 aaPredicted RBP18.8■□□□□ 0.6
RB1CC1-201ENST00000025008 SKIDA1Q1XH10 827 aa18.8■□□□□ 0.6
RB1CC1-201ENST00000025008 FAM177A1Q8N128 213 aaPredicted RBP18.8■□□□□ 0.6
RB1CC1-201ENST00000025008 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
RB1CC1-201ENST00000025008 PDRG1Q9NUG6 133 aa18.8■□□□□ 0.6
RB1CC1-201ENST00000025008 CTDP1Q9Y5B0 961 aaPredicted RBP18.8■□□□□ 0.6
RB1CC1-201ENST00000025008 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
RB1CC1-201ENST00000025008 STIM1Q13586 685 aa18.79■□□□□ 0.6
RB1CC1-201ENST00000025008 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
RB1CC1-201ENST00000025008 KIAA1107Q9UPP5 1409 aa18.79■□□□□ 0.6
RB1CC1-201ENST00000025008 CCDC102AQ96A19 550 aa18.79■□□□□ 0.6
RB1CC1-201ENST00000025008 STK3Q13188 491 aa18.79■□□□□ 0.6
RB1CC1-201ENST00000025008 ZFYVE27Q5T4F4 411 aa18.78■□□□□ 0.6
RB1CC1-201ENST00000025008 CALCOCO1Q9P1Z2 691 aa18.78■□□□□ 0.6
RB1CC1-201ENST00000025008 CBX1P83916 185 aa18.78■□□□□ 0.6
RB1CC1-201ENST00000025008 TRIM22Q8IYM9 498 aa18.78■□□□□ 0.6
RB1CC1-201ENST00000025008 CFAP70Q5T0N1 1121 aa18.78■□□□□ 0.6
RB1CC1-201ENST00000025008 CCDC183Q5T5S1 534 aa18.78■□□□□ 0.6
RB1CC1-201ENST00000025008 CGNQ9P2M7 1197 aaKnown RBP18.78■□□□□ 0.6
RB1CC1-201ENST00000025008 NBPF1Q3BBV0 1214 aa18.77■□□□□ 0.6
RB1CC1-201ENST00000025008 KIF18AQ8NI77 898 aa18.77■□□□□ 0.6
RB1CC1-201ENST00000025008 EVA1CP58658 441 aa18.77■□□□□ 0.6
RB1CC1-201ENST00000025008 KRT32Q14532 448 aa18.77■□□□□ 0.6
RB1CC1-201ENST00000025008 ZRSR2Q15696 482 aaKnown RBP18.77■□□□□ 0.6
RB1CC1-201ENST00000025008 CDK5RAP3Q96JB5 506 aa18.77■□□□□ 0.6
RB1CC1-201ENST00000025008 FBXO3Q9UK99 471 aa18.77■□□□□ 0.59
RB1CC1-201ENST00000025008 XPCQ01831 940 aaPredicted RBP18.76■□□□□ 0.59
RB1CC1-201ENST00000025008 CCAR1Q8IX12 1150 aaKnown RBP18.76■□□□□ 0.59
RB1CC1-201ENST00000025008 SFPQP23246 707 aaKnown RBP eCLIP18.76■□□□□ 0.59
RB1CC1-201ENST00000025008 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
RB1CC1-201ENST00000025008 PSME1Q06323 249 aa18.76■□□□□ 0.59
RB1CC1-201ENST00000025008 PLCD4Q9BRC7 762 aa18.76■□□□□ 0.59
RB1CC1-201ENST00000025008 UBE2Q2Q8WVN8 375 aa18.76■□□□□ 0.59
RB1CC1-201ENST00000025008 JAKMIP1Q96N16 626 aaKnown RBP18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 KDM4AO75164 1064 aa18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 ZSCAN12O43309 604 aa18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 PLEKHH2Q8IVE3 1493 aa18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
RB1CC1-201ENST00000025008 ARHGAP29Q52LW3 1261 aa18.74■□□□□ 0.59
RB1CC1-201ENST00000025008 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
RB1CC1-201ENST00000025008 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
RB1CC1-201ENST00000025008 PLEKHH1Q9ULM0 1364 aa18.74■□□□□ 0.59
RB1CC1-201ENST00000025008 CDKL5O76039 1030 aa18.74■□□□□ 0.59
RB1CC1-201ENST00000025008 HDGFL1Q5TGJ6 251 aa18.74■□□□□ 0.59
RB1CC1-201ENST00000025008 TNPO1Q92973 898 aaKnown RBP18.73■□□□□ 0.59
RB1CC1-201ENST00000025008 EPB41L2O43491 1005 aaKnown RBP18.73■□□□□ 0.59
RB1CC1-201ENST00000025008 SCAND2PQ9GZW5 306 aaPredicted RBP18.73■□□□□ 0.59
RB1CC1-201ENST00000025008 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.73■□□□□ 0.599e-6■□□□□ 8.3
RB1CC1-201ENST00000025008 DYNC1I1O14576 645 aa18.72■□□□□ 0.59
RB1CC1-201ENST00000025008 CRACR2AQ9BSW2 395 aa18.72■□□□□ 0.59
RB1CC1-201ENST00000025008 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
RB1CC1-201ENST00000025008 SYCP1Q15431 976 aa18.72■□□□□ 0.59
RB1CC1-201ENST00000025008 CCDC158Q5M9N0 1113 aa18.72■□□□□ 0.59
RB1CC1-201ENST00000025008 FYB1O15117 783 aa18.72■□□□□ 0.59
RB1CC1-201ENST00000025008 NEMFO60524 1076 aa18.72■□□□□ 0.59
RB1CC1-201ENST00000025008 SLC3A2P08195 630 aaKnown RBP18.72■□□□□ 0.59
RB1CC1-201ENST00000025008 CFAP100Q494V2 611 aa18.71■□□□□ 0.59
RB1CC1-201ENST00000025008 FAM193AP78312 1265 aa18.71■□□□□ 0.59
RB1CC1-201ENST00000025008 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.59
RB1CC1-201ENST00000025008 INCENPQ9NQS7 918 aa18.71■□□□□ 0.59
RB1CC1-201ENST00000025008 TMEM57Q8N5G2 664 aa18.71■□□□□ 0.59
RB1CC1-201ENST00000025008 NOL7Q9UMY1 257 aaKnown RBP18.71■□□□□ 0.59
RB1CC1-201ENST00000025008 SHTN1A0MZ66 631 aa18.7■□□□□ 0.58
RB1CC1-201ENST00000025008 CCDC148Q8NFR7 591 aa18.7■□□□□ 0.58
RB1CC1-201ENST00000025008 ANO10Q9NW15 660 aa18.7■□□□□ 0.58
RB1CC1-201ENST00000025008 SLC12A5Q9H2X9 1139 aa18.7■□□□□ 0.58
RB1CC1-201ENST00000025008 CENPHQ9H3R5 247 aa18.7■□□□□ 0.58
RB1CC1-201ENST00000025008 NEFHP12036 1026 aa18.7■□□□□ 0.58
RB1CC1-201ENST00000025008 NLRP6P59044 892 aa18.7■□□□□ 0.58
RB1CC1-201ENST00000025008 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
RB1CC1-201ENST00000025008 CFTRP13569 1480 aa18.69■□□□□ 0.58
RB1CC1-201ENST00000025008 SSFA2P28290 1259 aa18.69■□□□□ 0.58
RB1CC1-201ENST00000025008 PRIMPOLQ96LW4 560 aa18.69■□□□□ 0.58
RB1CC1-201ENST00000025008 CLCN1P35523 988 aa18.69■□□□□ 0.58
RB1CC1-201ENST00000025008 MAP9Q49MG5 647 aa18.69■□□□□ 0.58
RB1CC1-201ENST00000025008 CTNNA3Q9UI47 895 aa18.69■□□□□ 0.58
RB1CC1-201ENST00000025008 KRT18P05783 430 aaKnown RBP18.69■□□□□ 0.58
RB1CC1-201ENST00000025008 PLEKHO1Q53GL0 409 aaPredicted RBP18.68■□□□□ 0.58
RB1CC1-201ENST00000025008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■■■■■ 112.2
RB1CC1-201ENST00000025008 TNNT1P13805 278 aa18.68■□□□□ 0.58
RB1CC1-201ENST00000025008 CWC27Q6UX04 472 aaKnown RBP18.68■□□□□ 0.58
RB1CC1-201ENST00000025008 TTC39AQ5SRH9 613 aa18.68■□□□□ 0.58
RB1CC1-201ENST00000025008 GIMAP7Q8NHV1 300 aa18.68■□□□□ 0.58
RB1CC1-201ENST00000025008 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
RB1CC1-201ENST00000025008 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms