RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Slx1bQ8BX32 270 aa26.58■■□□□ 1.85
Lig3-209ENSMUST00000173009 NrdcQ8BHG1 1161 aa26.58■■□□□ 1.85
Lig3-209ENSMUST00000173009 Kiaa1107Q80TK0 1369 aa26.58■■□□□ 1.84
Lig3-209ENSMUST00000173009 Fnbp4Q6ZQ03 1031 aa26.57■■□□□ 1.84
Lig3-209ENSMUST00000173009 RgmbQ7TQ33 436 aa26.57■■□□□ 1.84
Lig3-209ENSMUST00000173009 U2af1Q9D883 239 aaKnown RBP26.57■■□□□ 1.84
Lig3-209ENSMUST00000173009 Atf7ipQ7TT18 1306 aa26.57■■□□□ 1.84
Lig3-209ENSMUST00000173009 OptnQ8K3K8 584 aa26.56■■□□□ 1.84
Lig3-209ENSMUST00000173009 Pard3Q99NH2 1333 aa26.56■■□□□ 1.84
Lig3-209ENSMUST00000173009 CrklP47941 303 aa26.56■■□□□ 1.84
Lig3-209ENSMUST00000173009 Lrp6O88572 1613 aa26.55■■□□□ 1.84
Lig3-209ENSMUST00000173009 MpripP97434 1024 aa26.55■■□□□ 1.84
Lig3-209ENSMUST00000173009 Eya1P97767 591 aa26.55■■□□□ 1.84
Lig3-209ENSMUST00000173009 PalmQ9Z0P4 383 aa26.55■■□□□ 1.84
Lig3-209ENSMUST00000173009 Parp14Q2EMV9 1817 aa26.54■■□□□ 1.84
Lig3-209ENSMUST00000173009 Eno4Q8C042 619 aa26.53■■□□□ 1.84
Lig3-209ENSMUST00000173009 Psrc1Q9D0P7 329 aa26.53■■□□□ 1.84
Lig3-209ENSMUST00000173009 Tcerg1Q8CGF7 1100 aaKnown RBP26.51■■□□□ 1.83
Lig3-209ENSMUST00000173009 Ptpn23Q6PB44 1692 aa26.51■■□□□ 1.83
Lig3-209ENSMUST00000173009 TkfcQ8VC30 578 aa26.49■■□□□ 1.83
Lig3-209ENSMUST00000173009 Esx1O88933 382 aa26.48■■□□□ 1.83
Lig3-209ENSMUST00000173009 Col15a1O35206 1367 aa26.48■■□□□ 1.83
Lig3-209ENSMUST00000173009 Pak3Q61036 559 aa26.47■■□□□ 1.83
Lig3-209ENSMUST00000173009 Plin1Q8CGN5 517 aa26.47■■□□□ 1.83
Lig3-209ENSMUST00000173009 InhbeO08717 350 aa26.46■■□□□ 1.83
Lig3-209ENSMUST00000173009 Zeb2Q9R0G7 1215 aa26.46■■□□□ 1.83
Lig3-209ENSMUST00000173009 Mcm10Q0VBD2 885 aa26.45■■□□□ 1.82
Lig3-209ENSMUST00000173009 Zfp777B9EKF4 885 aa26.44■■□□□ 1.82
Lig3-209ENSMUST00000173009 Zranb3Q6NZP1 1069 aa26.44■■□□□ 1.82
Lig3-209ENSMUST00000173009 Dmrt2Q8BG36 561 aa26.43■■□□□ 1.82
Lig3-209ENSMUST00000173009 Plekhd1B2RPU2 505 aa26.43■■□□□ 1.82
Lig3-209ENSMUST00000173009 Gm10471E9Q1C7 252 aa26.43■■□□□ 1.82
Lig3-209ENSMUST00000173009 Slit1Q80TR4 1531 aa26.42■■□□□ 1.82
Lig3-209ENSMUST00000173009 Ccdc129Q14B48 1034 aa26.42■■□□□ 1.82
Lig3-209ENSMUST00000173009 Zpr1Q62384 459 aa26.42■■□□□ 1.82
Lig3-209ENSMUST00000173009 Kdm6aO70546 1401 aa26.41■■□□□ 1.82
Lig3-209ENSMUST00000173009 Sf3b2Q3UJB0 878 aaKnown RBP26.41■■□□□ 1.82
Lig3-209ENSMUST00000173009 Fchsd2Q3USJ8 740 aa26.41■■□□□ 1.82
Lig3-209ENSMUST00000173009 Golga2Q921M4 999 aa26.41■■□□□ 1.82
Lig3-209ENSMUST00000173009 TnikP83510 1323 aa26.4■■□□□ 1.82
Lig3-209ENSMUST00000173009 Apaf1O88879 1249 aa26.39■■□□□ 1.82
Lig3-209ENSMUST00000173009 Ppp1r37Q8BKR5 712 aa26.39■■□□□ 1.82
Lig3-209ENSMUST00000173009 Fbln2P37889 1221 aa26.38■■□□□ 1.81
Lig3-209ENSMUST00000173009 Aplp2Q06335 707 aa26.38■■□□□ 1.81
Lig3-209ENSMUST00000173009 Shank2Q80Z38 1476 aa26.36■■□□□ 1.81
Lig3-209ENSMUST00000173009 Map4k4P97820 1233 aaKnown RBP26.36■■□□□ 1.81
Lig3-209ENSMUST00000173009 Stk31Q99MW1 1018 aa26.34■■□□□ 1.81
Lig3-209ENSMUST00000173009 Spef2Q8C9J3 1734 aa26.33■■□□□ 1.81
Lig3-209ENSMUST00000173009 Q4VA45 678 aa26.33■■□□□ 1.81
Lig3-209ENSMUST00000173009 Sgsm1Q8BPQ7 1093 aa26.33■■□□□ 1.81
Lig3-209ENSMUST00000173009 Cc2d1aQ8K1A6 943 aa26.33■■□□□ 1.81
Lig3-209ENSMUST00000173009 Simc1E9Q6E9 1354 aa26.33■■□□□ 1.81
Lig3-209ENSMUST00000173009 Larp1bA0A0A6YXJ7 370 aaKnown RBP26.33■■□□□ 1.8
Lig3-209ENSMUST00000173009 Nop58Q6DFW4 536 aaKnown RBP26.33■■□□□ 1.8
Lig3-209ENSMUST00000173009 Pm20d1Q8C165 503 aa26.33■■□□□ 1.8
Lig3-209ENSMUST00000173009 FocadA2AKG8 1798 aa26.32■■□□□ 1.8
Lig3-209ENSMUST00000173009 Mapk8ip3Q9ESN9 1337 aa26.31■■□□□ 1.8
Lig3-209ENSMUST00000173009 Gsdma3Q5Y4Y6 464 aa26.31■■□□□ 1.8
Lig3-209ENSMUST00000173009 Mak16Q8BGS0 296 aaKnown RBP26.31■■□□□ 1.8
Lig3-209ENSMUST00000173009 HypkQ9CR41 129 aa26.3■■□□□ 1.8
Lig3-209ENSMUST00000173009 Cabp2Q9JLK4 216 aa26.3■■□□□ 1.8
Lig3-209ENSMUST00000173009 ThemisQ8BGW0 636 aa26.3■■□□□ 1.8
Lig3-209ENSMUST00000173009 Fam50bQ9WTJ8 334 aa26.3■■□□□ 1.8
Lig3-209ENSMUST00000173009 Iqcf3Q9D498 203 aa26.28■■□□□ 1.8
Lig3-209ENSMUST00000173009 Stra8P70278 393 aa26.28■■□□□ 1.8
Lig3-209ENSMUST00000173009 Uspl1Q3ULM6 1089 aa26.28■■□□□ 1.8
Lig3-209ENSMUST00000173009 Usp19Q3UJD6 1360 aa26.26■■□□□ 1.79
Lig3-209ENSMUST00000173009 Tnrc6cQ3UHC0 1690 aaKnown RBP26.26■■□□□ 1.79
Lig3-209ENSMUST00000173009 TmpoQ61033 693 aaKnown RBP26.26■■□□□ 1.79
Lig3-209ENSMUST00000173009 Rab11fip3Q8CHD8 1047 aa26.26■■□□□ 1.79
Lig3-209ENSMUST00000173009 Akap11E9Q777 1895 aa26.26■■□□□ 1.79
Lig3-209ENSMUST00000173009 CrbnQ8C7D2 445 aa26.24■■□□□ 1.79
Lig3-209ENSMUST00000173009 Fer1l6E0CZ42 1862 aa26.23■■□□□ 1.79
Lig3-209ENSMUST00000173009 4930572O03RikQ8C5Y0 211 aa26.23■■□□□ 1.79
Lig3-209ENSMUST00000173009 Amotl1Q9D4H4 968 aa26.23■■□□□ 1.79
Lig3-209ENSMUST00000173009 Cavin4A2AMM0 362 aa26.21■■□□□ 1.79
Lig3-209ENSMUST00000173009 Cacna1sQ02789 1880 aa26.2■■□□□ 1.78
Lig3-209ENSMUST00000173009 Ankrd23Q812A3 306 aa26.2■■□□□ 1.78
Lig3-209ENSMUST00000173009 Dusp27Q148W8 1138 aa26.19■■□□□ 1.78
Lig3-209ENSMUST00000173009 Rad21Q61550 635 aaKnown RBP26.19■■□□□ 1.78
Lig3-209ENSMUST00000173009 Speer4bQ9D9F7 267 aa26.18■■□□□ 1.78
Lig3-209ENSMUST00000173009 Gm21680A0A0G2JGR8 267 aa26.18■■□□□ 1.78
Lig3-209ENSMUST00000173009 Sik1Q60670 779 aa26.18■■□□□ 1.78
Lig3-209ENSMUST00000173009 Ginm1Q91WR6 327 aa26.18■■□□□ 1.78
Lig3-209ENSMUST00000173009 Ltbp1Q8CG19 1712 aa26.17■■□□□ 1.78
Lig3-209ENSMUST00000173009 Znf541Q0GGX2 1363 aa26.16■■□□□ 1.78
Lig3-209ENSMUST00000173009 Swt1Q9DBQ9 907 aa26.16■■□□□ 1.78
Lig3-209ENSMUST00000173009 Snap23O09044 210 aa26.15■■□□□ 1.78
Lig3-209ENSMUST00000173009 Vps33bP59016 617 aa26.15■■□□□ 1.78
Lig3-209ENSMUST00000173009 Exoc5Q3TPX4 708 aa26.15■■□□□ 1.78
Lig3-209ENSMUST00000173009 Adgrb1Q3UHD1 1582 aa26.15■■□□□ 1.78
Lig3-209ENSMUST00000173009 Kat6bQ8BRB7 1872 aa26.15■■□□□ 1.78
Lig3-209ENSMUST00000173009 Kcnh4A2A5F7 1018 aa26.15■■□□□ 1.78
Lig3-209ENSMUST00000173009 Speer4f1Q9D5Q6 258 aa26.15■■□□□ 1.78
Lig3-209ENSMUST00000173009 Neurod2Q62414 383 aa26.14■■□□□ 1.78
Lig3-209ENSMUST00000173009 Mast2Q60592 1734 aa26.13■■□□□ 1.77
Lig3-209ENSMUST00000173009 Ciz1Q8VEH2 845 aa26.13■■□□□ 1.77
Lig3-209ENSMUST00000173009 Ahnak2E9PYB0 1738 aaKnown RBP26.12■■□□□ 1.77
Lig3-209ENSMUST00000173009 Arfgef2A2A5R2 1792 aa26.12■■□□□ 1.77
Lig3-209ENSMUST00000173009 Ddb1Q3U1J4 1140 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms