RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 InsrP15208 1372 aa12.4□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Duxf3A0A0N4SV92 674 aa12.4□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 March6Q6ZQ89 909 aa12.4□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Agtpbp1Q641K1 1218 aa12.4□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Igf2bp2Q5SF07 592 aaKnown RBP12.4□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Slc10a4Q3UEZ8 437 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Carmil1Q6EDY6 1374 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Gimap3Q99MI6 301 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Spg7Q3ULF4 781 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Prdm11A2AGX3 565 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 MccE9PWI3 1003 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Tnni2P13412 182 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Lrrcc1Q69ZB0 1026 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Ppp6r1Q7TSI3 856 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Golim4Q8BXA1 655 aa12.39□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Kif24Q6NWW5 1356 aa12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Puf60Q3UEB3 564 aaKnown RBP12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Matr3Q8K310 846 aaKnown RBP12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 PrimpolQ6P1E7 537 aa12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Bsdc1Q80Y55 427 aa12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Tceal9Q9DD24 104 aa12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Fam163aQ8CAA5 168 aa12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 EprsQ8CGC7 1512 aaKnown RBP12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Ces1aE9PYP1 563 aa12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Dok7Q18PE0 504 aa12.38□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Ttc21bQ0HA38 1315 aa12.37□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Smim5Q8BT42 78 aa12.37□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Soga3Q6NZL0 945 aa12.37□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 NsmfQ99NF2 532 aa12.37□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Hsp90ab1P11499 724 aaKnown RBP12.37□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 XpcP51612 930 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Prdm16A2A935 1275 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Cwc22Q8C5N3 908 aaKnown RBP12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Q8C6G1 249 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Ciapin1Q8WTY4 309 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Dydc2Q9D3X8 139 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Kcnj6P48542 425 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Btbd11Q6GQW0 1109 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Dbr1Q923B1 550 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Nup133Q8R0G9 1155 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Cep162Q6ZQ06 1403 aa12.36□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Crocc2F6XLV1 1638 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Kif21aQ9QXL2 1672 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Epb41l2O70318 988 aaKnown RBP12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Snx25Q3ZT31 840 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 GalcP54818 684 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Fads2p1Q0VAX3 487 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 4930504O13RikQ8C5Z9 145 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Tpd52l1O54818 204 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Galntl5Q9D4M9 431 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Ccdc88bQ4QRL3 1481 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Cdca8Q8BHX3 289 aa12.35□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 WdpcpQ8C456 722 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 PalmdQ9JHU2 551 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 MeiocA2AG06 965 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Ctnnal1O88327 731 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Nsrp1Q5NCR9 542 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Ccdc81Q9D5W4 654 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Ccdc27Q3V036 639 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Sp4Q62445 782 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Dennd4bQ3U1Y4 1499 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Pagr1bF6V0H0 108 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Slc4a8Q8JZR6 1089 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Pagr1aQ99L02 253 aa12.34□□□□□ -0.43
Pdgfra-202ENSMUST00000168162 Xpo5Q924C1 1204 aaKnown RBP12.33□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Samm50Q8BGH2 469 aa12.33□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Fhod3Q76LL6 1578 aa12.32□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Dcaf1Q80TR8 1506 aa12.32□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Eif3aP23116 1344 aaKnown RBP12.32□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Mcm10Q0VBD2 885 aa12.32□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Map3k11Q80XI6 850 aa12.32□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Crybg3Q80W49 1005 aa12.32□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Cbx1P83917 185 aaKnown RBP12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Nsd2Q8BVE8 1365 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 BccipQ9CWI3 316 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Bach1P97302 739 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 ThrspQ62264 150 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Tmod4Q9JLH8 345 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Tbc1d8Q9Z1A9 1134 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Lrrc43Q3V0L5 667 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Cyp7a1Q64505 503 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 RarsQ9D0I9 660 aaKnown RBP12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 PalmQ9Z0P4 383 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Styxl1Q9DAR2 321 aa12.31□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Usp48Q3V0C5 1052 aa12.3□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 AW822073A0A0N4SUK1 652 aa12.3□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Nkx2-3P97334 362 aa12.3□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Kiaa1841Q68FF0 718 aa12.3□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 TbcaP48428 108 aaKnown RBP12.29□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Znf526Q8BI66 675 aa12.29□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Sh3tc1G3X9F6 1346 aa12.29□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Fyco1Q8VDC1 1437 aa12.29□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Nacc1Q7TSZ8 514 aa12.28□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Fmn1Q05860 1466 aa12.28□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Sde2Q8K1J5 448 aaKnown RBP12.28□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 GptQ8QZR5 496 aa12.28□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 FktnQ8R507 461 aa12.28□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Bcs1lQ9CZP5 418 aa12.28□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Usp5P56399 858 aaKnown RBP12.28□□□□□ -0.44
Pdgfra-202ENSMUST00000168162 Speer4f1Q9D5Q6 258 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms