RNA–Protein interactions for RNA: ENSMUST00000162057.7

Cldnd1-204, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Cldnd1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-204ENSMUST00000162057 Eif4a2P10630 407 aa29.6■■■□□ 2.33
Cldnd1-204ENSMUST00000162057 Mrs2Q5NCE8 434 aa29.6■■■□□ 2.33
Cldnd1-204ENSMUST00000162057 Ccne1Q61457 408 aa29.6■■■□□ 2.33
Cldnd1-204ENSMUST00000162057 Shank2Q80Z38 1476 aa29.59■■■□□ 2.33
Cldnd1-204ENSMUST00000162057 Kat6bQ8BRB7 1872 aa29.59■■■□□ 2.33
Cldnd1-204ENSMUST00000162057 Atf7ipQ7TT18 1306 aa29.57■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Slc12a5Q91V14 1138 aa29.57■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 GsdmaQ9EST1 446 aa29.57■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Slit1Q80TR4 1531 aa29.57■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Spef2Q8C9J3 1734 aa29.56■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 OptnQ8K3K8 584 aa29.56■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Tnrc6cQ3UHC0 1690 aaKnown RBP29.56■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Kdm6aO70546 1401 aa29.56■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 CrklP47941 303 aa29.55■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Zeb2Q9R0G7 1215 aa29.55■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Tsen2Q6P7W5 460 aa29.54■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Cacna1sQ02789 1880 aa29.53■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Zfp777B9EKF4 885 aa29.53■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 RgmbQ7TQ33 436 aa29.53■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Kiaa1107Q80TK0 1369 aa29.52■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 InhbeO08717 350 aa29.52■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 TkfcQ8VC30 578 aa29.51■■■□□ 2.32
Cldnd1-204ENSMUST00000162057 Dmrt2Q8BG36 561 aa29.5■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 Psrc1Q9D0P7 329 aa29.5■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 Fer1l6E0CZ42 1862 aa29.5■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 Akap11E9Q777 1895 aa29.5■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 Plekhd1B2RPU2 505 aa29.49■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 Zscan21Q07231 555 aa29.49■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 Eya1P97767 591 aa29.48■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 Eno4Q8C042 619 aa29.48■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 U2af1Q9D883 239 aaKnown RBP29.47■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 PalmQ9Z0P4 383 aa29.46■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 Col15a1O35206 1367 aa29.46■■■□□ 2.31
Cldnd1-204ENSMUST00000162057 MpripP97434 1024 aa29.45■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Sf3b2Q3UJB0 878 aaKnown RBP29.44■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Pak3Q61036 559 aa29.43■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 NrdcQ8BHG1 1161 aa29.43■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Simc1E9Q6E9 1354 aa29.43■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Mast2Q60592 1734 aa29.42■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Ccdc129Q14B48 1034 aa29.41■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Gm10471E9Q1C7 252 aa29.4■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Zpr1Q62384 459 aa29.4■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Zranb3Q6NZP1 1069 aa29.4■■■□□ 2.3
Cldnd1-204ENSMUST00000162057 Ltbp1Q8CG19 1712 aa29.38■■■□□ 2.29
Cldnd1-204ENSMUST00000162057 Slc4a2P13808 1237 aaKnown RBP29.38■■■□□ 2.29
Cldnd1-204ENSMUST00000162057 Pm20d1Q8C165 503 aa29.38■■■□□ 2.29
Cldnd1-204ENSMUST00000162057 Adgrb1Q3UHD1 1582 aa29.36■■■□□ 2.29
Cldnd1-204ENSMUST00000162057 Arfgef2A2A5R2 1792 aa29.35■■■□□ 2.29
Cldnd1-204ENSMUST00000162057 Fchsd2Q3USJ8 740 aa29.35■■■□□ 2.29
Cldnd1-204ENSMUST00000162057 Ppp1r37Q8BKR5 712 aa29.35■■■□□ 2.29
Cldnd1-204ENSMUST00000162057 Tnks1bp1P58871 1720 aa29.33■■■□□ 2.29
Cldnd1-204ENSMUST00000162057 TnikP83510 1323 aa29.32■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Aplp2Q06335 707 aa29.32■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Nwd2Q6P5U7 1742 aa29.31■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Gsdma3Q5Y4Y6 464 aa29.3■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Sgsm1Q8BPQ7 1093 aa29.3■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Cc2d1aQ8K1A6 943 aa29.3■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Nup153E9Q3G8 1462 aaKnown RBP29.3■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Mcm10Q0VBD2 885 aa29.3■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Plin1Q8CGN5 517 aa29.3■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Golga2Q921M4 999 aa29.3■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Pcgf6Q99NA9 353 aa29.3■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Tcerg1Q8CGF7 1100 aaKnown RBP29.29■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Stk31Q99MW1 1018 aa29.29■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Ahnak2E9PYB0 1738 aaKnown RBP29.29■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Esx1O88933 382 aa29.28■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Mapk8ip3Q9ESN9 1337 aa29.28■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Znf541Q0GGX2 1363 aa29.27■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Map4k4P97820 1233 aaKnown RBP29.27■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Rab11fip3Q8CHD8 1047 aa29.27■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 HypkQ9CR41 129 aa29.27■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Trpm3Q5F4S9 1721 aa29.27■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 Mst1rQ62190 1378 aa29.27■■■□□ 2.28
Cldnd1-204ENSMUST00000162057 ThemisQ8BGW0 636 aa29.24■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 Ginm1Q91WR6 327 aa29.24■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 Iqcf3Q9D498 203 aa29.24■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 4930572O03RikQ8C5Y0 211 aa29.22■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 Fam50bQ9WTJ8 334 aa29.21■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 Usp19Q3UJD6 1360 aa29.2■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 Apaf1O88879 1249 aa29.2■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 Vps33bP59016 617 aa29.2■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 Q4VA45 678 aa29.2■■■□□ 2.27
Cldnd1-204ENSMUST00000162057 Larp1bA0A0A6YXJ7 370 aaKnown RBP29.2■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 Amotl1Q9D4H4 968 aa29.2■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 Ankrd23Q812A3 306 aa29.19■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 Kcnh4A2A5F7 1018 aa29.17■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 Cabp2Q9JLK4 216 aa29.17■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 Mak16Q8BGS0 296 aaKnown RBP29.16■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 Sik1Q60670 779 aa29.15■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 Tns2Q8CGB6 1400 aa29.15■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 TmpoQ61033 693 aaKnown RBP29.15■■■□□ 2.26
Cldnd1-204ENSMUST00000162057 Speer4bQ9D9F7 267 aa29.14■■■□□ 2.25
Cldnd1-204ENSMUST00000162057 Elp1Q7TT37 1333 aaKnown RBP29.13■■■□□ 2.25
Cldnd1-204ENSMUST00000162057 Ly75Q60767 1723 aa29.13■■■□□ 2.25
Cldnd1-204ENSMUST00000162057 Cavin4A2AMM0 362 aa29.13■■■□□ 2.25
Cldnd1-204ENSMUST00000162057 Gm21680A0A0G2JGR8 267 aa29.12■■■□□ 2.25
Cldnd1-204ENSMUST00000162057 Uspl1Q3ULM6 1089 aa29.12■■■□□ 2.25
Cldnd1-204ENSMUST00000162057 Ddb1Q3U1J4 1140 aaKnown RBP29.11■■■□□ 2.25
Cldnd1-204ENSMUST00000162057 Exoc5Q3TPX4 708 aa29.1■■■□□ 2.25
Cldnd1-204ENSMUST00000162057 PappaQ8R4K8 1624 aa29.1■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms