RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Cchcr1Q8K2I2 770 aa13.89□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Plcd3Q8K2J0 785 aa13.89□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Duxf3A0A0N4SV92 674 aa13.89□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Gas2l2Q5SSG4 860 aa13.89□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Ccdc141E9Q8Q6 1531 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Dnajc2P54103 621 aaKnown RBP13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Mcm2P97310 904 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Stk38Q91VJ4 465 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 4931400O07RikQ9D4M5 137 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Klf15Q9EPW2 415 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Sf3b2Q3UJB0 878 aaKnown RBP13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Plekhm2Q80TQ5 1018 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Nop14Q8R3N1 860 aaKnown RBP13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Dnajc5bQ9CQ94 199 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Gcc1Q9D4H2 778 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Nkx1-2P42580 305 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Vgll3P85442 326 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Srek1Q8BZX4 494 aaKnown RBP13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Rbm28Q8CGC6 750 aaKnown RBP13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Ptpdc1Q6NZK8 747 aa13.88□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Q3UPC7 1272 aa13.87□□□□□ -0.19
Ndc1-204ENSMUST00000139560 EappQ5BU09 281 aa13.87□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Rbm5Q91YE7 815 aaKnown RBP13.87□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Bcar3Q9QZK2 820 aa13.87□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Il16O54824 1322 aa13.87□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Ncoa1P70365 1447 aa13.87□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Eif4g1Q6NZJ6 1600 aaKnown RBP13.87□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Mcm10Q0VBD2 885 aa13.87□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Kri1Q8VDQ9 704 aaKnown RBP13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Lamb3Q61087 1168 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Pmfbp1Q9WVQ0 1022 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Tiam1Q60610 1591 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Zbtb21E9Q444 1094 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Prkar2bP31324 416 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Tceanc2Q8R2M0 207 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Kank1E9Q238 1360 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Gas2l3Q3UWW6 683 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 MvpQ9EQK5 861 aa13.86□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Ccdc102aQ3TMW1 549 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Nup88Q8CEC0 753 aaKnown RBP13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Noc3lQ8VI84 807 aaKnown RBP13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Neo1P97798 1493 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Naip5Q9R016 1403 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Gm21680A0A0G2JGR8 267 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Adcy5P84309 1262 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Gadd45bP22339 160 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Speer4bQ9D9F7 267 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Ipo7Q9EPL8 1038 aaKnown RBP13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Mrvi1Q9WUX5 899 aaKnown RBP13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 EvcP57680 1005 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Erich4Q3UNU4 136 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 PsapQ61207 557 aaKnown RBP13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Top1mtQ8R4U6 593 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 TefQ9JLC6 301 aa13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Psma5Q9Z2U1 241 aaKnown RBP13.85□□□□□ -0.19
Ndc1-204ENSMUST00000139560 F2rP30558 430 aa13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 ItpripQ3TNL8 555 aa13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 TmpoQ61033 693 aaKnown RBP13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Mug1P28665 1476 aa13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Gcom1E9PZ54 550 aa13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 MyzapQ3UIJ9 466 aa13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Gnl2Q99LH1 728 aaKnown RBP13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 SelenooQ9DBC0 667 aa13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Fsd1Q7TPM6 496 aa13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Rufy1Q8BIJ7 712 aa13.84□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Krt85Q9Z2T6 507 aa13.83□□□□□ -0.19
Ndc1-204ENSMUST00000139560 Ttc21bQ0HA38 1315 aa13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Abcc5Q9R1X5 1436 aa13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 CebpzP53569 1052 aaKnown RBP13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gjb2Q00977 226 aa13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 PhaxQ9JJT9 385 aaKnown RBP13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Chd1lQ9CXF7 900 aa13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Naip2Q9QUK4 1447 aa13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Prpf4bQ61136 1007 aaKnown RBP13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Klhdc4Q921I2 584 aa13.83□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Ccdc66Q6NS45 935 aa13.82□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Rnf187Q8BFX1 236 aa13.82□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Bin1O08539 588 aaKnown RBP13.82□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gnl3lQ6PGG6 577 aaKnown RBP13.82□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Zbtb3Q91X45 518 aa13.82□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Aldh1l1Q8R0Y6 902 aa13.82□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gm21663A0A0G2JE01 267 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gm7361D3Z6R1 267 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 5031410I06RikE9Q4E0 267 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gm1979E9QAN3 267 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gm5862K7N5V5 267 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gm10220K7N660 267 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Brf1Q8CFK2 676 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Fam50bQ9WTJ8 334 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Bag1Q60739 355 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Evc2Q8K1G2 1220 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 A2mQ6GQT1 1474 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Sass6Q80UK7 654 aa13.81□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Mmel1Q9JLI3 765 aa13.8□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Ccar2Q8VDP4 922 aaKnown RBP13.8□□□□□ -0.2
Ndc1-204ENSMUST00000139560 FanclQ9CR14 375 aa13.8□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Ppp1r42Q8R1Z4 357 aa13.8□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Stard3nlQ9DCI3 235 aa13.8□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Agtpbp1Q641K1 1218 aa13.8□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Pde1cQ64338 706 aa13.8□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms