RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Clstn2Q9ER65 966 aa9.21□□□□□ -0.93
Bdnf-209ENSMUST00000111050 Lrrc9Q8CDN9 1456 aa9.21□□□□□ -0.93
Bdnf-209ENSMUST00000111050 Adamts13Q769J6 1426 aa9.21□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Ica1lQ3TY65 431 aa9.21□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Lcmt1A0A0U1RNF2 332 aa9.21□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Gm45015A0A140LII9 184 aa9.21□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Gm18336A0A140LIU8 765 aa9.21□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Wwc1Q5SXA9 1104 aa9.21□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Tsen2Q6P7W5 460 aa9.21□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Ppp6r3Q922D4 844 aa9.21□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Fam184aE9PW83 1143 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 NmiO35309 314 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Cdkn1cP49919 348 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Ccdc96Q9CR92 584 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 AatfQ9JKX4 526 aaKnown RBP9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Spag9Q58A65 1321 aaKnown RBP9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Mcm3P25206 812 aaKnown RBP9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 NexnQ7TPW1 607 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Samm50Q8BGH2 469 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 CenppQ9CZ92 286 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Iqsec2Q5DU25 1478 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Gm20521D3Z5F7 333 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Zfp397Q7TNK4 527 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Tomm22Q9CPQ3 142 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Zkscan5Q9Z1D8 819 aa9.2□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Dixdc1Q80Y83 711 aa9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 CenpqQ9CPQ5 267 aa9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 RdxP26043 583 aaKnown RBP9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Pdia3P27773 505 aaKnown RBP9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Utp14aQ640M1 767 aaKnown RBP9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Nlrp3Q8R4B8 1033 aa9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Gtf2e1Q9D0D5 440 aa9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Nucb1Q02819 459 aaKnown RBP9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Zpr1Q62384 459 aa9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 WizO88286 1684 aaKnown RBP9.19□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Phactr2B1AVP0 632 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Arid4aF8VPQ2 1261 aaKnown RBP9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Zfp51Q3U4L8 781 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Trim27Q62158 513 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Shroom2A2ALU4 1481 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 IbtkQ6ZPR6 1352 aaKnown RBP9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Serpinb6bO08804 377 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Oxsr1Q6P9R2 527 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Phf20l1Q8CCJ9 1013 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Tmx1Q8VBT0 278 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Nol11Q8BJW5 723 aaKnown RBP9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Nphp4P59240 1425 aa9.18□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Cfap73J3QPZ5 306 aa9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Rapgef6Q5NCJ1 1609 aa9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Zkscan16A2ALW2 728 aa9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Brpf3B2KF05 1204 aaKnown RBP9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 CalcaP70160 136 aa9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 FanclQ9CR14 375 aa9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Ssh2Q5SW75 1423 aa9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Cdc42bpaQ3UU96 1719 aa9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 1700017N19RikA0A087WPJ1 469 aa9.17□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Q3UPC7 1272 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Eif4g2Q62448 906 aaKnown RBP9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Ulbp1Q8HWA3 334 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Smarca5Q91ZW3 1051 aaKnown RBP9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Ubl4bQ9CQ84 188 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 MvpQ9EQK5 861 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Ercc6F8VPZ5 1481 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Rusc2Q80U22 1514 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Kdm5aQ3UXZ9 1690 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Mctp2Q5RJH2 878 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Sall3Q62255 1320 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 St18Q80TY4 1045 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Q9D2X8 372 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 AatkQ80YE4 1365 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Ccdc34Q3UI66 367 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Tbc1d30Q69ZT9 766 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 PxdnQ3UQ28 1475 aa9.16□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Vwa3bJ9JI28 736 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Dnajc2P54103 621 aaKnown RBP9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Rtel1Q0VGM9 1203 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Filip1lQ6P6L0 1131 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Snx13Q6PHS6 957 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Znf771Q8BJ90 317 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Usp40Q8BWR4 1235 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Rsph4aQ8BYM7 716 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Syt10Q9R0N4 523 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Zbtb22Q9Z0G7 638 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Zscan29E9Q5B4 869 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Zfp597E9Q6S0 419 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Babam1Q3UI43 333 aa9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Elp1Q7TT37 1333 aaKnown RBP9.15□□□□□ -0.94
Bdnf-209ENSMUST00000111050 Cchcr1Q8K2I2 770 aa9.15□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Pcdhgc5Q91XW9 944 aa9.15□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Nrbp1Q99J45 535 aa9.15□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Nol7Q9D7Z3 254 aaKnown RBP9.15□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Lrriq3Q14DL3 633 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Cgnl1Q6AW69 1298 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ift57Q8BXG3 429 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Fbxo3Q9DC63 480 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ap5z1Q3U829 807 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 EappQ5BU09 281 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Naip7Q9JIB3 1402 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Cfap74Q3UY96 1578 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 AnkarA2RT91 1465 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms