RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Nutm1Q8BHP2 1126 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Jakmip1Q8BVL9 626 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 ClasrpQ8CFC7 668 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Wwc1Q5SXA9 1104 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Map2k1P31938 393 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Fchsd2Q3USJ8 740 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Cog6Q8R3I3 657 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Clul1Q3ZRW6 464 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 TatQ8QZR1 454 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Jakmip3Q5DTN8 844 aa12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Arhgef18Q6P9R4 1021 aa12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Jade2Q6ZQF7 829 aa12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Pabpn1Q8CCS6 302 aaKnown RBP12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Smc1aQ9CU62 1233 aaKnown RBP12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 TbcaP48428 108 aaKnown RBP12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ncbp1Q3UYV9 790 aaKnown RBP12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Tmc1Q8R4P5 757 aa12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 StambpQ9CQ26 424 aa12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Acbd3Q8BMP6 525 aa12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Brms1Q99N20 246 aa12.56□□□□□ -0.4
Vcan-202ENSMUST00000109544 Smtnl1Q99LM3 459 aa12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Atad2bE9Q166 1460 aaKnown RBP12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Slc4a2P13808 1237 aaKnown RBP12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Fsd1Q7TPM6 496 aa12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Rufy2Q8R4C2 606 aa12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Dydc1Q9D9T0 175 aa12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ddx19aQ61655 478 aaKnown RBP12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Smc1bQ920F6 1248 aa12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ccdc39Q9D5Y1 937 aa12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Nap1l5Q9JJF0 156 aa12.55□□□□□ -0.4
Vcan-202ENSMUST00000109544 Plekhd1B2RPU2 505 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Abl1P00520 1123 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Gse1Q3U3C9 1213 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Washc4Q3UMB9 1173 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Maats1Q8BRC6 783 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Babam1Q3UI43 333 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Nol7Q9D7Z3 254 aaKnown RBP12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Sos1Q62245 1319 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 BcanQ61361 883 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Zpr1Q62384 459 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ankrd1Q9CR42 319 aa12.54□□□□□ -0.4
Vcan-202ENSMUST00000109544 Hspa4Q61316 841 aa12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ppip5k2Q6ZQB6 1129 aa12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Myom3A2ABU4 1439 aa12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Polr1aO35134 1717 aaKnown RBP12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 LrpprcQ6PB66 1392 aaKnown RBP12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ubap1lG3UW59 384 aa12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Naa15Q80UM3 865 aaKnown RBP12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ccdc172Q810N9 267 aa12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Syce3B5KM66 88 aa12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Samm50Q8BGH2 469 aa12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ppm1fQ8CGA0 452 aa12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 CarsQ9ER72 831 aaKnown RBP12.53□□□□□ -0.4
Vcan-202ENSMUST00000109544 Ccdc112A0AUP1 442 aa12.52□□□□□ -0.4
Vcan-202ENSMUST00000109544 Nap1l2P51860 460 aa12.52□□□□□ -0.4
Vcan-202ENSMUST00000109544 Fsd2Q8BZ52 692 aa12.52□□□□□ -0.4
Vcan-202ENSMUST00000109544 MvpQ9EQK5 861 aa12.52□□□□□ -0.4
Vcan-202ENSMUST00000109544 Stxbp4Q9WV89 557 aa12.52□□□□□ -0.4
Vcan-202ENSMUST00000109544 Secisbp2lQ6A098 1086 aaKnown RBP12.52□□□□□ -0.41
Vcan-202ENSMUST00000109544 Smco2Q9DA21 347 aa12.52□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ift140E9PY46 1464 aa12.52□□□□□ -0.41
Vcan-202ENSMUST00000109544 Uri1Q3TLD5 531 aa12.52□□□□□ -0.41
Vcan-202ENSMUST00000109544 MlecQ6ZQI3 291 aaKnown RBP12.52□□□□□ -0.41
Vcan-202ENSMUST00000109544 Frmd3Q8BHD4 595 aa12.52□□□□□ -0.41
Vcan-202ENSMUST00000109544 Tdrd9Q14BI7 1383 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ncapg2Q6DFV1 1138 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Rcan3Q9JKK0 239 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Atp2b2Q9R0K7 1198 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Gsdma2Q32M21 443 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Exoc8Q6PGF7 716 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Lrrfip2Q91WK0 415 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Trim11Q99PQ2 467 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Stk11ipQ3TAA7 1072 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Tubb4aQ9D6F9 444 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Mcm4P49717 862 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Dusp27Q148W8 1138 aa12.51□□□□□ -0.41
Vcan-202ENSMUST00000109544 Akap2O54931 893 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ccdc73Q8CDM4 1066 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Cct4P80315 539 aaKnown RBP12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Cecr2E9Q2Z1 1453 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Gm1979E9QAN3 267 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Cbx1P83917 185 aaKnown RBP12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ctage5Q8R311 779 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Irgm2A0A140LIF8 407 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Kcnj4P52189 445 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Trim25Q61510 634 aaKnown RBP12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Q7TT23 1179 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Iqca1Q9CUL5 857 aa12.5□□□□□ -0.41
Vcan-202ENSMUST00000109544 Fbf1A2A870 1173 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Cwc27Q3TKY6 469 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Nol8Q3UHX0 1147 aaKnown RBP12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Smg7Q5RJH6 1138 aaKnown RBP12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Tsg101Q61187 391 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Srgap3Q812A2 1099 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 TimelessQ9R1X4 1197 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Pms1Q8K119 917 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 DmtnQ9WV69 405 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ssr1Q9CY50 286 aaKnown RBP12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ptpdc1Q6NZK8 747 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Hook3Q8BUK6 718 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms