RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Fsd1Q7TPM6 496 aa18.37■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Lrrfip2Q91WK0 415 aa18.37■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Gm18336A0A140LIU8 765 aa18.37■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Gigyf2Q6Y7W8 1291 aaKnown RBP18.37■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Gsdma3Q5Y4Y6 464 aa18.36■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Ccdc171E9Q1U1 1324 aa18.36■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Tfip11Q9ERA6 838 aaKnown RBP18.36■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Vgll3P85442 326 aa18.36■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Smc1bQ920F6 1248 aa18.36■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Nphp1Q9QY53 687 aa18.36■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Dusp27Q148W8 1138 aa18.35■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Gm7361D3Z6R1 267 aa18.35■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Gm10471E9Q1C7 252 aa18.35■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Maats1Q8BRC6 783 aa18.35■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Apaf1O88879 1249 aa18.35■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Ttll5Q8CHB8 1328 aa18.35■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Fam184aE9PW83 1143 aa18.35■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Ercc3P49135 783 aa18.35■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Jakmip3Q5DTN8 844 aa18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Ncapg2Q6DFV1 1138 aa18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Gcc1Q9D4H2 778 aa18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Zeb2Q9R0G7 1215 aa18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Smc1aQ9CU62 1233 aaKnown RBP18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Dnaaf4Q8R368 420 aa18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Gsto1O09131 240 aa18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Jade2Q6ZQF7 829 aa18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Adck5Q80V03 582 aa18.34■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Dnajc2P54103 621 aaKnown RBP18.33■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Cwc27Q3TKY6 469 aa18.33■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Dhx57Q6P5D3 1388 aaKnown RBP18.33■□□□□ 0.53
Ubr3-201ENSMUST00000055758 IqcgQ80W32 419 aa18.33■□□□□ 0.53
Ubr3-201ENSMUST00000055758 TchpQ3TVW5 497 aa18.33■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Slc4a2P13808 1237 aaKnown RBP18.33■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Eif3j1Q3UGC7 261 aaKnown RBP18.33■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Eif3j2Q66JS6 263 aa18.33■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Trap1aP19473 224 aa18.33■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Cep57l1Q8VDS7 400 aa18.33■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Cfap45Q9D9U9 551 aa18.33■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Fbf1A2A870 1173 aa18.32■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Fyb1O35601 819 aa18.32■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Rapgef2Q8CHG7 1496 aa18.32■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Vps37cQ8R105 352 aa18.32■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Serpina10Q8R121 448 aa18.32■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Rnf34Q99KR6 376 aa18.32■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Bbof1Q3V079 533 aa18.32■□□□□ 0.52
Ubr3-201ENSMUST00000055758 PnisrA2AJT4 805 aaKnown RBP18.31■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Srgap3Q812A2 1099 aa18.31■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Als2cr12Q8BVM7 383 aa18.31■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Mcm3P25206 812 aaKnown RBP18.31■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Gas2l3Q3UWW6 683 aa18.31■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Ehmt1Q5DW34 1296 aa18.31■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Iqca1Q9CUL5 857 aa18.31■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Klf15Q9EPW2 415 aa18.31■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Zbtb22Q9Z0G7 638 aa18.3■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Znf131Q8K3J5 619 aa18.3■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Acbd3Q8BMP6 525 aa18.3■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Mnat1P51949 309 aa18.3■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Rcan3Q9JKK0 239 aa18.3■□□□□ 0.52
Ubr3-201ENSMUST00000055758 RalylQ8BTF8 293 aa18.29■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Rab3il1Q8VDV3 383 aa18.29■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Wdr33Q8K4P0 1330 aaKnown RBP18.29■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Cyp26c1B2RXA7 518 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Hvcn1Q3U2S8 269 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Ccdc39Q9D5Y1 937 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Atp2b2Q9R0K7 1198 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Cdc45Q9Z1X9 566 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Spty2d1Q68FG3 682 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Rbm5Q91YE7 815 aaKnown RBP18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Paxbp1P58501 919 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Erlin1Q91X78 346 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Tubb6Q922F4 447 aa18.28■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Fkbp4P30416 458 aa18.27■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Pof1bQ8K4L4 587 aa18.27■□□□□ 0.52
Ubr3-201ENSMUST00000055758 4933428M09RikQ9D3X3 192 aa18.27■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Dhx29Q6PGC1 1365 aaKnown RBP18.27■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Ctr9Q62018 1173 aaKnown RBP18.27■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Plcd3Q8K2J0 785 aa18.27■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Luzp1Q8R4U7 1068 aaKnown RBP18.27■□□□□ 0.52
Ubr3-201ENSMUST00000055758 Zscan20B2KFW1 1030 aa18.27■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Hspa4Q61316 841 aa18.26■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Rufy2Q8R4C2 606 aa18.26■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ercc6lQ8BHK9 1240 aa18.26■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Golim4Q8BXA1 655 aa18.26■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Gm1979E9QAN3 267 aa18.26■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Syap1Q9D5V6 365 aa18.26■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Gm21671G3UY31 267 aa18.26■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Cavin4A2AMM0 362 aa18.25■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ccdc73Q8CDM4 1066 aa18.25■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Fam107bQ3TGF2 131 aa18.25■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Fsd2Q8BZ52 692 aa18.25■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Pms1Q8K119 917 aa18.25■□□□□ 0.51
Ubr3-201ENSMUST00000055758 MpripP97434 1024 aa18.25■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Cnnm1Q0GA42 951 aa18.25■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Soga3Q6NZL0 945 aa18.25■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ppp2r1aQ76MZ3 589 aa18.24■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ccdc93Q7TQK5 629 aa18.24■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Nbr1P97432 988 aa18.24■□□□□ 0.51
Ubr3-201ENSMUST00000055758 CarsQ9ER72 831 aaKnown RBP18.24■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Mcm4P49717 862 aa18.24■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ppp6r1Q7TSI3 856 aa18.24■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms