RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Sept11Q8C1B7 431 aaKnown RBP16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Eif3j1Q3UGC7 261 aaKnown RBP16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Eif3j2Q66JS6 263 aa16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Gimap6Q8K349 305 aa16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Ppp6r1Q7TSI3 856 aa16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Gtf2a1Q99PM3 378 aa16.88■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Mink1Q9JM52 1308 aa16.88■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Ncapg2Q6DFV1 1138 aa16.88■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Slu7Q8BHJ9 585 aa16.87■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Rnf214Q8BFU3 668 aaKnown RBP16.87■□□□□ 0.29
Col7a1-201ENSMUST00000026740 NcapgE9PWG6 1004 aa16.87■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Phldb1Q6PDH0 1371 aaKnown RBP16.87■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Naa15Q80UM3 865 aaKnown RBP16.87■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Ppfibp2O35711 882 aa16.87■□□□□ 0.29
Col7a1-201ENSMUST00000026740 CastP51125 788 aa16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Chrna2Q91X60 512 aa16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Ripk4Q9ERK0 786 aa16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Fbf1A2A870 1173 aa16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Nolc1E9Q5C9 702 aaKnown RBP16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Samd1D3YXK1 519 aa16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Trap1aP19473 224 aa16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Clul1Q3ZRW6 464 aa16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Hmgb1P63158 215 aaKnown RBP16.86■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Sycp2Q9CUU3 1500 aa16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Trim30cD3YVI9 513 aa16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Wdr33Q8K4P0 1330 aaKnown RBP16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Abl1P00520 1123 aa16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Gsdma2Q32M21 443 aa16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Soga1E1U8D0 1418 aa16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Cnnm3Q32NY4 713 aa16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 TatQ8QZR1 454 aa16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Ssr1Q9CY50 286 aaKnown RBP16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 4921504E06RikQ8CET2 560 aa16.85■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Tsg101Q61187 391 aa16.84■□□□□ 0.29
Col7a1-201ENSMUST00000026740 ClasrpQ8CFC7 668 aa16.84■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Luzp1Q8R4U7 1068 aaKnown RBP16.84■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Gm18336A0A140LIU8 765 aa16.84■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Rnf187Q8BFX1 236 aa16.84■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Rbm5Q91YE7 815 aaKnown RBP16.84■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Calml4Q91WQ9 153 aa16.83■□□□□ 0.29
Col7a1-201ENSMUST00000026740 ImmtQ8CAQ8 757 aaKnown RBP16.83■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Fermt1P59113 677 aa16.83■□□□□ 0.28
Col7a1-201ENSMUST00000026740 CftrP26361 1476 aa16.83■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Gm1979E9QAN3 267 aa16.83■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Abcf1Q6P542 837 aaKnown RBP16.83■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Gnl2Q99LH1 728 aaKnown RBP16.83■□□□□ 0.28
Col7a1-201ENSMUST00000026740 ZgpatQ8VDM1 511 aa16.82■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Trim11Q99PQ2 467 aa16.82■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Shtn1Q8K2Q9 631 aa16.82■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Fsd2Q8BZ52 692 aa16.82■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Nphp1Q9QY53 687 aa16.82■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Vps36Q91XD6 386 aa16.82■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Fsd1Q7TPM6 496 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Stk3Q9JI10 497 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Rab3il1Q8VDV3 383 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Ankrd1Q9CR42 319 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Ehbp1Q69ZW3 1231 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Knop1Q9Z2Q2 478 aaKnown RBP16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Gbp1Q01514 589 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Zfp853A0A1D5RM95 733 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Vps37dQ810I0 261 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Ift57Q8BXG3 429 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Smco2Q9DA21 347 aa16.81■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Tubb4bP68372 445 aaKnown RBP16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Ift140E9PY46 1464 aa16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Sdccag8Q80UF4 717 aa16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Prdm16A2A935 1275 aa16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Flad1Q8R123 492 aa16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Gm21671G3UY31 267 aa16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Ecm2Q5FW85 670 aa16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 CactinQ9CS00 772 aaKnown RBP16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Sos1Q62245 1319 aa16.8■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Jade2Q6ZQF7 829 aa16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Esx1O88933 382 aa16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Sf3b2Q3UJB0 878 aaKnown RBP16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Gigyf2Q6Y7W8 1291 aaKnown RBP16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Efcab5A0JP43 1406 aa16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Gle1Q8R322 699 aa16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Smc1bQ920F6 1248 aa16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Apol7aB2RT54 418 aa16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Jakmip3Q5DTN8 844 aa16.79■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Trim34aQ99PP6 485 aa16.78■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Nup88Q8CEC0 753 aaKnown RBP16.78■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Akap2O54931 893 aa16.78■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Sept7O55131 436 aa16.78■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Pdcl2Q78Y63 240 aa16.78■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Iqca1Q9CUL5 857 aa16.77■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Skor1Q8BX46 964 aa16.77■□□□□ 0.28
Col7a1-201ENSMUST00000026740 TkfcQ8VC30 578 aa16.77■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Shroom4Q1W617 1475 aa16.77■□□□□ 0.28
Col7a1-201ENSMUST00000026740 Fnbp4Q6ZQ03 1031 aa16.77■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Mctp1E9PV86 951 aa16.77■□□□□ 0.27
Col7a1-201ENSMUST00000026740 L1td1Q587J6 782 aaKnown RBP16.77■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Pank1Q8K4K6 548 aa16.77■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Wdr63B2RY71 923 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Zeb2Q9R0G7 1215 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 AcrbpQ3V140 540 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Olfml1Q8BSH2 233 aa16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Top2aQ01320 1528 aaKnown RBP16.76■□□□□ 0.27
Col7a1-201ENSMUST00000026740 Gm21680A0A0G2JGR8 267 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms