RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Q9D2X8 372 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Mapkbp1Q6NS57 1503 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Cfap74Q3UY96 1578 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Arhgef11Q68FM7 1552 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 NinlQ6ZQ12 1394 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Fmn2Q9JL04 1578 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 ImpactO55091 318 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Me1P06801 572 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Cchcr1Q8K2I2 770 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 DmtnQ9WV69 405 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Lrrc9Q8CDN9 1456 aa12.88□□□□□ -0.35
Ciita-201ENSMUST00000023147 Usp16Q99LG0 825 aa12.88□□□□□ -0.35
Ciita-201ENSMUST00000023147 Cyp46a1Q9WVK8 500 aa12.88□□□□□ -0.35
Ciita-201ENSMUST00000023147 Terf2O35144 541 aa12.88□□□□□ -0.35
Ciita-201ENSMUST00000023147 Setbp1Q9Z180 1582 aa12.88□□□□□ -0.35
Ciita-201ENSMUST00000023147 Ppip5k1A2ARP1 1436 aa12.88□□□□□ -0.35
Ciita-201ENSMUST00000023147 Zkscan2G3X952 960 aa12.88□□□□□ -0.35
Ciita-201ENSMUST00000023147 Apaf1O88879 1249 aa12.88□□□□□ -0.35
Ciita-201ENSMUST00000023147 Map3k4O08648 1597 aa12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 Dixdc1Q80Y83 711 aa12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 Fam184aE9PW83 1143 aa12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 Ints3Q7TPD0 1041 aaKnown RBP12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 Cc2d1aQ8K1A6 943 aa12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 Dennd4bQ3U1Y4 1499 aa12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 Ssh2Q5SW75 1423 aa12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 Uspl1Q3ULM6 1089 aa12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 MvpQ9EQK5 861 aa12.87□□□□□ -0.35
Ciita-201ENSMUST00000023147 Ttc41Q692V3 1318 aa12.86□□□□□ -0.35
Ciita-201ENSMUST00000023147 Erlin2Q8BFZ9 340 aa12.86□□□□□ -0.35
Ciita-201ENSMUST00000023147 Slc52a2Q9D8F3 450 aa12.86□□□□□ -0.35
Ciita-201ENSMUST00000023147 Pip4k2aO70172 405 aa12.86□□□□□ -0.35
Ciita-201ENSMUST00000023147 Trappc8E9PWG2 1437 aa12.86□□□□□ -0.35
Ciita-201ENSMUST00000023147 Neurod6P48986 337 aa12.86□□□□□ -0.35
Ciita-201ENSMUST00000023147 Luc7lQ9CYI4 371 aaKnown RBP12.85□□□□□ -0.35
Ciita-201ENSMUST00000023147 PdcQ9QW08 244 aa12.85□□□□□ -0.35
Ciita-201ENSMUST00000023147 Ttc21bQ0HA38 1315 aa12.85□□□□□ -0.35
Ciita-201ENSMUST00000023147 Mns1Q61884 491 aa12.85□□□□□ -0.35
Ciita-201ENSMUST00000023147 Kiaa0753Q6A000 959 aa12.85□□□□□ -0.35
Ciita-201ENSMUST00000023147 Phactr2B1AVP0 632 aa12.85□□□□□ -0.35
Ciita-201ENSMUST00000023147 Hnrnpul1Q8VDM6 859 aaKnown RBP12.85□□□□□ -0.35
Ciita-201ENSMUST00000023147 AcrbpQ3V140 540 aa12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 Sos1Q62245 1319 aa12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 Fam135bQ9DAI6 1403 aa12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 Tmco3Q8BH01 678 aa12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 Mbd5B1AYB6 1498 aa12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 Atp10dQ8K2X1 1416 aa12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 Lrrc45Q8CIM1 670 aa12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 CarsQ9ER72 831 aaKnown RBP12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 Erbb3Q61526 1339 aa12.84□□□□□ -0.35
Ciita-201ENSMUST00000023147 Pnmal2G3X9N3 661 aa12.83□□□□□ -0.35
Ciita-201ENSMUST00000023147 PogkQ80TC5 607 aa12.83□□□□□ -0.35
Ciita-201ENSMUST00000023147 Ppm1eQ80TL0 749 aa12.83□□□□□ -0.35
Ciita-201ENSMUST00000023147 IbtkQ6ZPR6 1352 aaKnown RBP12.83□□□□□ -0.36
Ciita-201ENSMUST00000023147 Aldh1l1Q8R0Y6 902 aa12.83□□□□□ -0.36
Ciita-201ENSMUST00000023147 NcapgE9PWG6 1004 aa12.83□□□□□ -0.36
Ciita-201ENSMUST00000023147 Gsdma3Q5Y4Y6 464 aa12.83□□□□□ -0.36
Ciita-201ENSMUST00000023147 Fnbp4Q6ZQ03 1031 aa12.83□□□□□ -0.36
Ciita-201ENSMUST00000023147 Maco1Q7TQE6 664 aaKnown RBP12.83□□□□□ -0.36
Ciita-201ENSMUST00000023147 Chmp4cQ9D7F7 232 aa12.83□□□□□ -0.36
Ciita-201ENSMUST00000023147 Nectin2P32507 530 aa12.83□□□□□ -0.36
Ciita-201ENSMUST00000023147 Nutm1Q8BHP2 1126 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Def6Q8C2K1 630 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Rbm10Q99KG3 930 aaKnown RBP12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Gm21190A0A0G2JGJ6 266 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Cdkn1cP49919 348 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Hdgfl1Q2VPR5 283 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Samd1D3YXK1 519 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 OptnQ8K3K8 584 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Kiaa1551Q5DTW7 1521 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Dhx8A2A4P0 1244 aaKnown RBP12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Gse1Q3U3C9 1213 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Rsph6aQ8CDR2 708 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Ccdc96Q9CR92 584 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Tex14Q7M6U3 1450 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Gtf2f1Q3THK3 508 aaKnown RBP12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Ppip5k2Q6ZQB6 1129 aa12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Psma5Q9Z2U1 241 aaKnown RBP12.82□□□□□ -0.36
Ciita-201ENSMUST00000023147 Gbp4Q61107 620 aa12.81□□□□□ -0.36
Ciita-201ENSMUST00000023147 Anapc15-psA0A140T8L6 141 aa12.81□□□□□ -0.36
Ciita-201ENSMUST00000023147 Fyb1O35601 819 aa12.81□□□□□ -0.36
Ciita-201ENSMUST00000023147 Rnf214Q8BFU3 668 aaKnown RBP12.81□□□□□ -0.36
Ciita-201ENSMUST00000023147 Duxf3A0A0N4SV92 674 aa12.81□□□□□ -0.36
Ciita-201ENSMUST00000023147 Nop14Q8R3N1 860 aaKnown RBP12.81□□□□□ -0.36
Ciita-201ENSMUST00000023147 Kif21bQ9QXL1 1668 aa12.8□□□□□ -0.36
Ciita-201ENSMUST00000023147 Prl7d1P04769 244 aa12.8□□□□□ -0.36
Ciita-201ENSMUST00000023147 SrrtQ99MR6 875 aaKnown RBP12.8□□□□□ -0.36
Ciita-201ENSMUST00000023147 Gps2Q921N8 327 aa12.8□□□□□ -0.36
Ciita-201ENSMUST00000023147 Cfdp1O88271 295 aaKnown RBP12.8□□□□□ -0.36
Ciita-201ENSMUST00000023147 PaskQ8CEE6 1383 aa12.8□□□□□ -0.36
Ciita-201ENSMUST00000023147 Odf2lQ9D478 642 aa12.8□□□□□ -0.36
Ciita-201ENSMUST00000023147 Znf704Q9ERQ3 566 aa12.8□□□□□ -0.36
Ciita-201ENSMUST00000023147 Gm10093D3YYI8 482 aa12.79□□□□□ -0.36
Ciita-201ENSMUST00000023147 Hdac1O09106 482 aaKnown RBP12.79□□□□□ -0.36
Ciita-201ENSMUST00000023147 Pdia4P08003 638 aaKnown RBP12.79□□□□□ -0.36
Ciita-201ENSMUST00000023147 Tfip11Q9ERA6 838 aaKnown RBP12.79□□□□□ -0.36
Ciita-201ENSMUST00000023147 Map9Q3TRR0 646 aa12.78□□□□□ -0.36
Ciita-201ENSMUST00000023147 Bcl11bQ99PV8 884 aa12.78□□□□□ -0.36
Ciita-201ENSMUST00000023147 Cdc37l1Q9CZP7 335 aa12.78□□□□□ -0.36
Ciita-201ENSMUST00000023147 Hmox1P14901 289 aa12.78□□□□□ -0.36
Ciita-201ENSMUST00000023147 Ercc6lQ8BHK9 1240 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms