RNA–Protein interactions for RNA: ENSMUST00000002198.3

Sf3a1-201, Transcript of Splicing factor 3A subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3a1, Length 4,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1-201ENSMUST00000002198 Flad1Q8R123 492 aa17.49■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Nphp1Q9QY53 687 aa17.49■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Cers3Q1A3B0 383 aa17.48■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Cavin2Q63918 418 aaKnown RBP17.48■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Iffo2Q8R2V2 512 aa17.48■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Clasp1Q80TV8 1535 aaKnown RBP17.48■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Setd1bQ8CFT2 1985 aa17.48■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Ak9G3UYQ4 1894 aa17.48■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 KinQ8K339 391 aa17.48■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 4933402E13RikQ9D4D2 429 aa17.48■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Hmgb2P30681 210 aaKnown RBP17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Btbd11Q6GQW0 1109 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 AppP12023 770 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Rsph6aQ8CDR2 708 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Dnai2A2AC93 623 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Vsig10D3YX43 558 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Plekhm2Q80TQ5 1018 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Nutm1Q8BHP2 1126 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Cnnm1Q0GA42 951 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Rnf20Q5DTM8 973 aa17.47■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Smg7Q5RJH6 1138 aaKnown RBP17.46■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 AU022751B1B0V2 589 aa17.46■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Q8C5K5 320 aa17.46■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Kdm2bQ6P1G2 1309 aa17.46■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Ccne1Q61457 408 aa17.46■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 St18Q80TY4 1045 aa17.46■□□□□ 0.39
Sf3a1-201ENSMUST00000002198 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Ggnbp2Q5SV77 696 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Kdm5aQ3UXZ9 1690 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Cyb5rlB1AS42 316 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Filip1lQ6P6L0 1131 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Setd1aE9PYH6 1716 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Knl1Q66JQ7 1612 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Hap1O35668 628 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Maco1Q7TQE6 664 aaKnown RBP17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Glipr1l2Q9CQ35 332 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Mum1Q6DID5 682 aa17.45■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 PnnO35691 725 aaKnown RBP17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Stard3nlQ9DCI3 235 aa17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Myo3aQ8K3H5 1613 aa17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Q8BT18 775 aa17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Casq1O09165 405 aa17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Plcd4Q8K3R3 807 aa17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Ccdc47Q9D024 483 aaKnown RBP17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Speer4bQ9D9F7 267 aa17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 KarsQ99MN1 595 aaKnown RBP17.44■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Smc5Q8CG46 1101 aaKnown RBP17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Atxn3Q9CVD2 355 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Fkbp4P30416 458 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Dip2cE9PWR4 1557 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Gm21663A0A0G2JE01 267 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Gm7361D3Z6R1 267 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 5031410I06RikE9Q4E0 267 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Gm1979E9QAN3 267 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Gm5862K7N5V5 267 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Gm10220K7N660 267 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 1700010I14RikQ7TPG0 532 aa17.43■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Q9D2X8 372 aa17.42■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Scaf11E9PZM7 1456 aaKnown RBP17.42■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Abca6Q8K441 1624 aa17.42■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Adgrb3Q80ZF8 1522 aa17.42■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Amotl1Q9D4H4 968 aa17.41■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Gm21680A0A0G2JGR8 267 aa17.41■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Cchcr1Q8K2I2 770 aa17.41■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Hecw2Q6I6G8 1578 aa17.4■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 ChgaP26339 463 aaKnown RBP17.4■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Rhot2Q8JZN7 620 aa17.4■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 GnpatP98192 678 aa17.39■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 Nek4Q9Z1J2 792 aa17.39■□□□□ 0.38
Sf3a1-201ENSMUST00000002198 ShprhQ7TPQ3 1674 aa17.39■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Eif4a2P10630 407 aa17.39■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Eif2s2Q99L45 331 aaKnown RBP17.39■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Fam135bQ9DAI6 1403 aa17.39■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Asxl2Q8BZ32 1370 aa17.39■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Kidins220E9Q9B7 1793 aa17.39■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 CarsQ9ER72 831 aaKnown RBP17.39■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Hmox1P14901 289 aa17.38■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Elp1Q7TT37 1333 aaKnown RBP17.38■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Cdc42bpbQ7TT50 1713 aa17.38■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Dzip1Q8BMD2 852 aa17.38■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Iqgap3F8VQ29 1632 aa17.38■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Kif18aQ91WD7 886 aa17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Gm973E9Q295 1059 aa17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Bcl2l13P59017 434 aa17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Sf3b2Q3UJB0 878 aaKnown RBP17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Dixdc1Q80Y83 711 aa17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 OptnQ8K3K8 584 aa17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Iqgap1Q9JKF1 1657 aaKnown RBP17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Fndc1E9Q043 1732 aa17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Zranb1Q7M760 708 aa17.37■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Ankrd44B2RXR6 993 aa17.36■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Q3UPC7 1272 aa17.36■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Ddx54Q8K4L0 874 aaKnown RBP17.36■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Tecpr2Q3UH45 1423 aa17.35■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Srgap3Q812A2 1099 aa17.35■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 AnlnQ8K298 1121 aaKnown RBP17.35■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Cct4P80315 539 aaKnown RBP17.34■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Itsn2Q9Z0R6 1659 aa17.34■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 Psma5Q9Z2U1 241 aaKnown RBP17.34■□□□□ 0.37
Sf3a1-201ENSMUST00000002198 RereQ80TZ9 1558 aa17.34■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms