RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CDH4P55283 916 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 RNASE9P60153 205 aaKnown RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 SRSF6Q13247 344 aaKnown RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 CLN3Q13286 438 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 C1orf61Q13536 156 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ARTNQ5T4W7 220 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ZCCHC8Q6NZY4 707 aaKnown RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 DCUN1D2Q6PH85 259 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 INO80CQ6PI98 192 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 OLFML1Q6UWY5 402 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ZNF662Q6ZS27 426 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 PARGQ86W56 976 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ZDHHC17Q8IUH5 632 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ZNF683Q8IZ20 524 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 C3orf20Q8ND61 904 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 TMIEQ8NEW7 156 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 SLC35G2Q8TBE7 412 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ZNF564Q8TBZ8 553 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 LMX1AQ8TE12 382 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 SNRNP27Q8WVK2 155 aaKnown RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 C16orf45Q96MC5 204 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 SLC46A1Q96NT5 459 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 MCEEQ96PE7 176 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ALS2CR12Q96Q35 445 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 DUSP23Q9BVJ7 150 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 SLC17A9Q9BYT1 436 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 DPH1Q9BZG8 443 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 MRPL47Q9HD33 250 aaKnown RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 METTL5Q9NRN9 209 aaKnown RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 KCND1Q9NSA2 647 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 PIGVQ9NUD9 493 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 MPP6Q9NZW5 540 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 UVRAGQ9P2Y5 699 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 IL36AQ9UHA7 158 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ANAPC7Q9UJX3 599 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 ITM2BQ9Y287 266 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-222ENST00000641587 FADS3Q9Y5Q0 445 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 NAV2Q8IVL1 2488 aa10.18□□□□□ -0.78
PHGDH-222ENST00000641587 SPTY2D1-AS1A0A0U1RR47 76 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 EME2A4GXA9 379 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-222ENST00000641587 NEMP2A6NFY4 417 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 BTNL10A8MVZ5 291 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 CDRT15L2A8MXV6 281 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 MUSKO15146 869 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 AQP9O43315 295 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 HSF2BPO75031 334 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 DAB1O75553 588 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 PRNPP04156 253 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 KRT3P12035 628 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 ADRB3P13945 408 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 JUNDP17535 347 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 RBMS1P29558 406 aaKnown RBP10.17□□□□□ -0.78
PHGDH-222ENST00000641587 GKP32189 559 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 ABL2P42684 1182 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 DUSP3P51452 185 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-222ENST00000641587 NEK3P51956 506 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 NFKB2Q00653 900 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 SLC6A3Q01959 620 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 EIF2B5Q13144 721 aaKnown RBP10.17□□□□□ -0.78
PHGDH-222ENST00000641587 MAMLD1Q13495 774 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 PDE1CQ14123 709 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-222ENST00000641587 TCEA2Q15560 299 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 C5orf22Q49AR2 442 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 ZNF569Q5MCW4 686 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 PLEKHA7Q6IQ23 1121 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 PARS2Q7L3T8 475 aaKnown RBP10.17□□□□□ -0.78
PHGDH-222ENST00000641587 PRICKLE2Q7Z3G6 844 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 SLC35F3Q8IY50 421 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 DCAF4L2Q8NA75 395 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 OR6K2Q8NGY2 324 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 IFT43Q96FT9 208 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 MED8Q96G25 268 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 CCDC114Q96M63 670 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 KLF6Q99612 283 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-222ENST00000641587 C2orf49Q9BVC5 232 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-222ENST00000641587 HDAC8Q9BY41 377 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 TM6SF2Q9BZW4 377 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 TKTL2Q9H0I9 626 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 SYNDIG1Q9H7V2 258 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 USP29Q9HBJ7 922 aa10.17□□□□□ -0.78
PHGDH-222ENST00000641587 IGLON5A6NGN9 336 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 H3BM21 787 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 EFSO43281 561 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 GCATO75600 419 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 PALMO75781 387 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 TNFSF15O95150 251 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 GLI1P08151 1106 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 CELA2BP08218 269 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-222ENST00000641587 DESP17661 470 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 DNA2P51530 1060 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 CCNHP51946 323 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-222ENST00000641587 GSCP56915 257 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-222ENST00000641587 GNG11P61952 73 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 RPS21P63220 83 aaKnown RBP10.16□□□□□ -0.78
PHGDH-222ENST00000641587 ARF5P84085 180 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 KCNC4Q03721 635 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 NFATC3Q12968 1075 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms