RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ARHGEF7Q14155 803 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 MORF4L2Q15014 288 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 TPSAB1Q15661 275 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CST6Q15828 149 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CRY1Q16526 586 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 ZNF805Q5CZA5 627 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 ALG1LQ6GMV1 187 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CASC4Q6P4E1 433 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 ERMP1Q7Z2K6 904 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 PRUNE1Q86TP1 453 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 HOOK3Q86VS8 718 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 TMPRSS6Q8IU80 811 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 PGBD5Q8N414 524 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 SLC25A41Q8N5S1 370 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 GPR161Q8N6U8 529 aaKnown RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CNTD1Q8N815 330 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 NOA1Q8NC60 698 aaKnown RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 CHST14Q8NCH0 376 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 SPATA22Q8NHS9 363 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 RUBCNQ92622 972 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 FEM1CQ96JP0 617 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 SPACA7Q96KW9 195 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 TDRD1Q9BXT4 1180 aaKnown RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 FAM129AQ9BZQ8 928 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 TSPYL1Q9H0U9 437 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 MTG2Q9H4K7 406 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 EPB41L5Q9HCM4 733 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 XAB2Q9HCS7 855 aaKnown RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 WHRNQ9P202 907 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 RPL26L1Q9UNX3 145 aaKnown RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 SNX24Q9Y343 169 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 MTF2Q9Y483 593 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-218ENST00000641491 PCDHB9Q9Y5E1 797 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 PCDHGC4Q9Y5F7 938 aa13.07□□□□□ -0.32
PHGDH-218ENST00000641491 KIAA1549LQ6ZVL6 1849 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 METTL18O95568 372 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 NDST3O95803 873 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 SLC4A1P02730 911 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 AOC1P19801 751 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 ITGB7P26010 798 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 AVPR2P30518 371 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 GKP32189 559 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 SLC8A1P32418 973 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 CD68P34810 354 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-218ENST00000641491 RGRP47804 291 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 GRIA4P48058 902 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 CXCL12P48061 93 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 SUOXP51687 545 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 CLCN5P51795 746 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 NUBP1P53384 320 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 ARL4CP56559 192 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 SKOR1P84550 965 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 SATB1Q01826 763 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 ELP6Q0PNE2 266 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 ENPP2Q13822 863 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 SEPT6Q14141 434 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 ANO7Q6IWH7 933 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 TTC7BQ86TV6 843 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 KBTBD6Q86V97 674 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 CAMK1DQ8IU85 385 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 PDIK1LQ8N165 341 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 HDDC3Q8N4P3 179 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 PPHLN1Q8NEY8 458 aaKnown RBP13.06□□□□□ -0.32
PHGDH-218ENST00000641491 HCAR2Q8TDS4 363 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 EZH1Q92800 747 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-218ENST00000641491 HHIPQ96QV1 700 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 RSPH9Q9H1X1 276 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-218ENST00000641491 BFARQ9NZS9 450 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 PHTF1Q9UMS5 762 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 CHKBQ9Y259 395 aa13.06□□□□□ -0.32
PHGDH-218ENST00000641491 GOLGA8MH3BSY2 632 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 MID1O15344 667 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 ADAM23O75077 832 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 ZNF217O75362 1048 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 PGLSO95336 258 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 TUBBP07437 444 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 CR2P20023 1033 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 ITGA8P53708 1063 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 PLTPP55058 493 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 FAM193AP78312 1265 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 PDE1BQ01064 536 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 GALNT3Q14435 633 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 SPARCL1Q14515 664 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 CENPUQ71F23 418 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 ERN2Q76MJ5 926 aaKnown RBP13.05□□□□□ -0.32
PHGDH-218ENST00000641491 GLIS1Q8NBF1 620 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 ARRDC2Q8TBH0 407 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 CXorf40AQ8TE69 158 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 RAB7BQ96AH8 199 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 CLDN23Q96B33 292 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 MLPHQ9BV36 600 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-218ENST00000641491 HACD3Q9P035 362 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 PPM1HQ9ULR3 514 aa13.05□□□□□ -0.32
PHGDH-218ENST00000641491 MYOFQ9NZM1 2061 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 NYNRINQ9P2P1 1898 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms