RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PRDM16Q9HAZ2 1276 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 PDLIM7Q9NR12 457 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 GIN1Q9NXP7 522 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 CROTQ9UKG9 612 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 UBR3Q6ZT12 1888 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SLC7A1P30825 629 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 HPCAL1P37235 193 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 TPD52P55327 224 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-227ENST00000640957 POU6F1Q14863 301 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 HSDL1Q3SXM5 330 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 LIPMQ5VYY2 423 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SCIMPQ6UWF3 145 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 RETREG3Q86VR2 466 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 WDR49Q8IV35 697 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 HS3ST5Q8IZT8 346 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 TMEM174Q8WUU8 243 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SNX27Q96L92 541 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 TEPSINQ96N21 525 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 MRPL4Q9BYD3 311 aaKnown RBP13.86□□□□□ -0.19
SCARB2-227ENST00000640957 NACA2Q9H009 215 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 PORCNQ9H237 461 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 HOXC10Q9NYD6 342 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ZNF214Q9UL59 606 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-227ENST00000640957 VANGL2Q9ULK5 521 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SNX10Q9Y5X0 201 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 DHRS12A0PJE2 317 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 DYTNA2CJ06 578 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 NFKBIEO00221 500 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 UBA1P22314 1058 aaKnown RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 CD151P48509 253 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 DPYSQ14117 519 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 FAM214AQ32MH5 1076 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 INAVAQ3KP66 663 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 NCBP2-AS2Q69YL0 99 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 VASH1Q7L8A9 365 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 LDB1Q86U70 411 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 FBXO16Q8IX29 292 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 KDM1BQ8NB78 822 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 FNIP1Q8TF40 1166 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 CHPT1Q8WUD6 406 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 TMEM74Q96NL1 305 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 CEP44Q9C0F1 390 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 KIAA1522Q9P206 1035 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 PADI4Q9UM07 663 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 A0A0A0MRY4 1105 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 ADM5C9JUS6 153 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 H3BMM5 538 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 HUS1O60921 280 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 SRP72O76094 671 aaKnown RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 DDNO94850 711 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 ENDOD1O94919 500 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 INHBBP09529 407 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 LIMK2P53671 638 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 PRKAA1Q13131 559 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 MOGQ16653 247 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 BOLA3Q53S33 107 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 JADE1Q6IE81 842 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 LGI2Q8N0V4 545 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 DHRSXQ8N5I4 330 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 TXNDC5Q8NBS9 432 aaKnown RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 HM13Q8TCT9 377 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 VPS33AQ96AX1 596 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 SPATA33Q96N06 139 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 SPATA13Q96N96 652 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 OSBPL2Q9H1P3 480 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 NANOGQ9H9S0 305 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 RPF1Q9H9Y2 349 aaKnown RBP13.85□□□□□ -0.19
SCARB2-227ENST00000640957 CPQQ9Y646 472 aa13.85□□□□□ -0.19
SCARB2-227ENST00000640957 H0Y858 1186 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 GCATO75600 419 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 CNTFP26441 200 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 MZF1P28698 734 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-227ENST00000640957 PRKAA2P54646 552 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 IL1RL1Q01638 556 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 AQP6Q13520 282 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 SOWAHAQ2M3V2 549 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 PYCR3Q53H96 274 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 FAM160B1Q5W0V3 765 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 ABHD11Q8NFV4 315 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 NSMCE3Q96MG7 304 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 CPNE1Q99829 537 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 UNC93B1Q9H1C4 597 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 GIT1Q9Y2X7 761 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 DOCK5Q9H7D0 1870 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 ADGRA2Q96PE1 1338 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 CDH5P33151 784 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-227ENST00000640957 NAMPTP43490 491 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 SEMA5AQ13591 1074 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 ACAP2Q15057 778 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 ITIH5Q86UX2 942 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 KIAA2013Q8IYS2 634 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 ALPK1Q96QP1 1244 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 ABCB10Q9NRK6 738 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 ATP11BQ9Y2G3 1177 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 LRRC14BA6NHZ5 514 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 LACTBL1A8MY62 500 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 NME4O00746 187 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 NOBOXO60393 691 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 GABBR2O75899 941 aa13.84□□□□□ -0.19
SCARB2-227ENST00000640957 TKTP29401 623 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms