RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TMCO1Q9UM00 188 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 TIMM22Q9Y584 194 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 C2orf71A6NGG8 1288 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 COPEO14579 308 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 ZWINTO95229 277 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 IGLV3-27P01718 113 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 TACR2P21452 398 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 NFKBIAP25963 317 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 NMBRP28336 390 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 SLC6A4P31645 630 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 CHRNA4P43681 627 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 DSG1Q02413 1049 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 HSP90AA5PQ58FG0 334 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 UMODL1-AS1Q8N2C9 162 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 WBP2Q969T9 261 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 CERS2Q96G23 380 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 CYP2S1Q96SQ9 504 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 TTLL2Q9BWV7 592 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 SP110Q9HB58 689 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 FBXO6Q9NRD1 293 aaPredicted RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 TMEM248Q9NWD8 314 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 ZNF180Q9UJW8 692 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 YIPF1Q9Y548 306 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 ACTL7AQ9Y615 435 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 COL4A6Q14031 1691 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 GJB3O75712 270 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 USP1O94782 785 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 ABLIM3O94929 683 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 ASLP04424 464 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 IRX4P78413 519 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 NIPAL4Q0D2K0 466 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 TWF1Q12792 350 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 THOC5Q13769 683 aaKnown RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 POLD3Q15054 466 aaPredicted RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 ANKRD20A4Q4UJ75 823 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 NAPEPLDQ6IQ20 393 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 TTC7BQ86TV6 843 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 SLC25A41Q8N5S1 370 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 CDKL2Q92772 493 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 ATP2A3Q93084 1043 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 APOPT1Q96IL0 206 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 SRPK1Q96SB4 655 aaKnown RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 SPG21Q9NZD8 308 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 DCTN4Q9UJW0 460 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 DOCK4Q8N1I0 1966 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 ERI2A8K979 691 aaKnown RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 WASH4PA8MWX3 477 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 RPS24P62847 133 aaKnown RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 SLC18A2Q05940 514 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 CDH17Q12864 832 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 GSTA3Q16772 222 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 SPDYAQ5MJ70 313 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 HECTD3Q5T447 861 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 TIGD7Q6NT04 549 aaPredicted RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 FBXO46Q6PJ61 603 aaPredicted RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 IZUMO2Q6UXV1 221 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 NDUFAF2Q8N183 169 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 CFAP61Q8NHU2 1237 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 ZNF75CPQ92670 426 aaPredicted RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 ALKBH8Q96BT7 664 aaKnown RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 FCRL5Q96RD9 977 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 TBL1YQ9BQ87 522 aa11.62□□□□□ -0.55
CLN6-217ENST00000636964 AAR2Q9Y312 384 aaKnown RBP11.62□□□□□ -0.55
CLN6-217ENST00000636964 IGLV3-10A0A075B6K4 115 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 A0A0D9SEW6 157 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 ZCWPW2A0A1B0GU75 182 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 TMEM247A6NEH6 219 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 TSPAN3O60637 253 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 RAMP2O60895 175 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 TMCC1O94876 653 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 PEX11BO96011 259 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 KLKB1P03952 638 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 URODP06132 367 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 RASSF2P50749 326 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 SLC18A1P54219 525 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 ZNF33AQ06730 810 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 NAT14Q8WUY8 206 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 NAT9Q9BTE0 207 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 MECRQ9BV79 373 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 FSD1LQ9BXM9 530 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 EBF3Q9H4W6 596 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 KCNK13Q9HB14 408 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 SSU72Q9NP77 194 aaKnown RBP11.61□□□□□ -0.55
CLN6-217ENST00000636964 SAR1AQ9NR31 198 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 TRPM5Q9NZQ8 1165 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 TXNDC16Q9P2K2 825 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 PPARGC1AQ9UBK2 798 aaKnown RBP11.61□□□□□ -0.55
CLN6-217ENST00000636964 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.61□□□□□ -0.55
CLN6-217ENST00000636964 F5H5T6 163 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 MAP3K7O43318 606 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 HARS2P49590 506 aaKnown RBP11.61□□□□□ -0.55
CLN6-217ENST00000636964 NDST2P52849 883 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 DSC2Q02487 901 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 PLOD1Q02809 727 aaPredicted RBP11.61□□□□□ -0.55
CLN6-217ENST00000636964 SPANXN3Q5MJ09 141 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 MARC1Q5VT66 337 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 TMEM135Q86UB9 458 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 OR52K2Q8NGK3 314 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 RC3H2Q9HBD1 1191 aaKnown RBP11.61□□□□□ -0.55
CLN6-217ENST00000636964 TRPC7Q9HCX4 862 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms