RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NFS1Q9Y697 457 aa4.51□□□□□ -1.69
BRCA1-229ENST00000621897 GRID2O43424 1007 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 IGHV4-30-4P0DP06 118 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 EDN2P20800 178 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 SLC12A1Q13621 1099 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 EFR3AQ14156 821 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 SOWAHAQ2M3V2 549 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 EDRF1Q3B7T1 1238 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 GRAMD1BQ3KR37 738 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 ZNF667Q5HYK9 610 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 GORABQ5T7V8 394 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 CES5AQ6NT32 575 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 KLHL24Q6TFL4 600 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 USP43Q70EL4 1123 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 SPATA5Q8NB90 893 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 ERGIC1Q969X5 290 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 REEP2Q9BRK0 252 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 PYM1Q9BRP8 204 aaKnown RBP4.5□□□□□ -1.69
BRCA1-229ENST00000621897 CYSLTR2Q9NS75 346 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 PAM16Q9Y3D7 125 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 PCDHGB5Q9Y5G0 923 aa4.5□□□□□ -1.69
BRCA1-229ENST00000621897 SAA2-SAA4A0A096LPE2 208 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 A0A0U1RQF3 1178 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 hDV102S1A0JD36 115 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 ARHGAP10A1A4S6 786 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 TYW5A2RUC4 315 aaKnown RBP4.49□□□□□ -1.69
BRCA1-229ENST00000621897 KLRF2D3W0D1 207 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 HSPA12AO43301 675 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 BUB3O43684 328 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 PEX14O75381 377 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 BLKP51451 505 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 CLDN2P57739 230 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 BRWD1-AS2P59051 145 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 SETQ01105 290 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-229ENST00000621897 WBP2NLQ6ICG8 309 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 LDHAL6AQ6ZMR3 332 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 ZNF771Q7L3S4 317 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-229ENST00000621897 SHFQ7M4L6 423 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 USP38Q8NB14 1042 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 RUFY2Q8WXA3 655 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 BICD1Q96G01 975 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 LRFN5Q96NI6 719 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 IL17FQ96PD4 163 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 CD180Q99467 661 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 EYA3Q99504 573 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 TAOK3Q9H2K8 898 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 ALKBH4Q9NXW9 302 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 DONSONQ9NYP3 566 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 SLC9A2Q9UBY0 812 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 GPR52Q9Y2T5 361 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 A3GALT2U3KPV4 340 aa4.49□□□□□ -1.69
BRCA1-229ENST00000621897 CPED1A4D0V7 1026 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 TULP2O00295 520 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 ITGAXP20702 1163 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 HALP42357 657 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 HDAC4P56524 1084 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 TBL3Q12788 808 aaKnown RBP4.48□□□□□ -1.69
BRCA1-229ENST00000621897 RUNX2Q13950 521 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 EFNB3Q15768 340 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 KRTAP24-1Q3LI83 254 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 HSP90AB4PQ58FF6 505 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 MUC20Q8N307 709 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-229ENST00000621897 RFLNBQ8N5W9 214 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 PARP16Q8N5Y8 322 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 GJC3Q8NFK1 279 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 CSF3RQ99062 836 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 NOX4Q9NPH5 578 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 CTNNAL1Q9UBT7 734 aa4.48□□□□□ -1.69
BRCA1-229ENST00000621897 MAGEA13PA6NCF6 341 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 PRAC2D3DTV9 90 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 KLK8O60259 260 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 KDM4BO94953 1096 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 PMS2P2O95744 297 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 F7P08709 466 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-229ENST00000621897 ZNF8P17098 575 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-229ENST00000621897 PEX5P50542 639 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 CHRNDQ07001 517 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 TDGQ13569 410 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 ARHGEF6Q15052 776 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 ZRSR1Q15695 479 aaKnown RBP4.47□□□□□ -1.69
BRCA1-229ENST00000621897 WDR45BQ5MNZ6 344 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 PAPPA-AS1Q5QFB9 102 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 MAP3K21Q5TCX8 1036 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 GFI1BQ5VTD9 330 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 LRRC8EQ6NSJ5 796 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 BBS12Q6ZW61 710 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 NEK10Q6ZWH5 1172 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 ADGRG6Q86SQ4 1221 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 TBC1D26Q86UD7 250 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 NOXA1Q86UR1 476 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 FAM160B2Q86V87 743 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 ZC3HC1Q86WB0 502 aaKnown RBP4.47□□□□□ -1.69
BRCA1-229ENST00000621897 CPOQ8IVL8 374 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 KIAA2013Q8IYS2 634 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 NR4A3Q92570 626 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 SNAPC3Q92966 411 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 ELP4Q96EB1 424 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 ISCA1Q9BUE6 129 aa4.47□□□□□ -1.69
BRCA1-229ENST00000621897 NUF2Q9BZD4 464 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms