RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 GPSM3Q9Y4H4 160 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 H0YCG3 227 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 CSF2P04141 144 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 CD48P09326 243 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 HDCP19113 662 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 BCAT1P54687 386 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 PMS2P3Q13401 168 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 FBXO48Q5FWF7 155 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 ARL13AQ5H913 290 aaPredicted RBP12.58□□□□□ -0.4
SYNRG-229ENST00000621136 CYP20A1Q6UW02 462 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 P2RY8Q86VZ1 359 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 FAM131BQ86XD5 332 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 CENPLQ8N0S6 344 aaPredicted RBP12.58□□□□□ -0.4
SYNRG-229ENST00000621136 SLC27A5Q9Y2P5 690 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 CEPT1Q9Y6K0 416 aa12.58□□□□□ -0.4
SYNRG-229ENST00000621136 SAGE2PA6NJ88 616 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 SERPINB7O75635 380 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 GPD1P21695 349 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 HTR2BP41595 481 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 NRG1Q02297 640 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 HERC3Q15034 1050 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 ZMYND11Q15326 602 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 TTC23Q5W5X9 447 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 RASSF6Q6ZTQ3 369 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 IGFN1Q86VF2 1251 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 AMIGO1Q86WK6 493 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 PGAM4Q8N0Y7 254 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 LRRC71Q8N4P6 559 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 CDK5RAP1Q96SZ6 601 aaKnown RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 APOL4Q9BPW4 351 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 FAM49AQ9H0Q0 323 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 BTRCQ9Y297 605 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 HSPB11Q9Y547 144 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 KANSL1LA0AUZ9 987 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 PLSCR1O15162 318 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 MOCS2O96007 188 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 CSH1P0DML2 217 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 CSH2P0DML3 217 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 MXD1Q05195 221 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 VPS26BQ4G0F5 336 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 VAT1Q99536 393 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 RPF1Q9H9Y2 349 aaKnown RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 CDH9Q9ULB4 789 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 hCG_1818297A0A087WSY0 165 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 TFEBP19484 476 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 SLC26A3P40879 764 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 QPRTQ15274 297 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 DUOXA2Q1HG44 320 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 TYW3Q6IPR3 259 aaKnown RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 VPS35Q96QK1 796 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 NODALQ96S42 347 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 MTMR12Q9C0I1 747 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 BRD7Q9NPI1 651 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 DDX43Q9NXZ2 648 aaKnown RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 NYAP2Q9P242 653 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 TMEM221A6NGB7 291 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 HTRA2O43464 458 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 ABCB1P08183 1280 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 OPRL1P41146 370 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 TUBA3CQ13748 450 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 DDR2Q16832 855 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 PYDC2Q56P42 97 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 ANGEL2Q5VTE6 544 aaKnown RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 AHSA2Q719I0 299 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 EID3Q8N140 333 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 SAMD3Q8N6K7 520 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 TFB1MQ8WVM0 346 aaKnown RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 CCDC177Q9NQR7 707 aaPredicted RBP12.57□□□□□ -0.4
SYNRG-229ENST00000621136 STARD7Q9NQZ5 370 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 SNX15Q9NRS6 342 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 TBX20Q9UMR3 447 aa12.57□□□□□ -0.4
SYNRG-229ENST00000621136 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 TK2O00142 265 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 NDUFS2O75306 463 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 CHRNB1P11230 501 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 KDELR1P24390 212 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 RAB15P59190 212 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 ANGPT1Q15389 498 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.56□□□□□ -0.4
SYNRG-229ENST00000621136 GRPEL2Q8TAA5 225 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 PIK3R3Q92569 461 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 MID1IP1Q9NPA3 183 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 PLK2Q9NYY3 685 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 CNOT6Q9ULM6 557 aaKnown RBP12.56□□□□□ -0.4
SYNRG-229ENST00000621136 C3orf70A6NLC5 250 aaPredicted RBP12.56□□□□□ -0.4
SYNRG-229ENST00000621136 B4GAT1O43505 415 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 TOMM70O94826 608 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 CST1P01037 141 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 CD4P01730 458 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 ETV4P43268 484 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 NOMO3P69849 1222 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 JAG1P78504 1218 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 ILF2Q12905 390 aaKnown RBP12.56□□□□□ -0.4
SYNRG-229ENST00000621136 ARL13BQ3SXY8 428 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 HSF5Q4G112 596 aaPredicted RBP12.56□□□□□ -0.4
SYNRG-229ENST00000621136 PLET1Q6UQ28 207 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms