RNA–Protein interactions for RNA: ENST00000618504.4

PDE4DIP-247, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2 BASIC

Gene PDE4DIP, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-247ENST00000618504 SMAD6O43541 496 aaKnown RBP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 ZNF821O75541 412 aaPredicted RBP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 FAM155BO75949 473 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 PRLP01236 227 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 DLDP09622 509 aaKnown RBP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 TPH1P17752 444 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 NR1D1P20393 614 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 SERPINA4P29622 427 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 CHRNA4P43681 627 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 SLCO1A2P46721 670 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 PDE1BQ01064 536 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 ACVR1Q04771 509 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 BCL2L1Q07817 233 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 TRAF2Q12933 501 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 SMAD4Q13485 552 aaKnown RBP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 POU6F1Q14863 301 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 GEN1Q17RS7 908 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 CARD16Q5EG05 197 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 TSTD2Q5T7W7 516 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 ARMC12Q5T9G4 340 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 PARM1Q6UWI2 310 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 EP400NLQ6ZTU2 488 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 NUDT18Q6ZVK8 323 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 CNTN4Q8IWV2 1026 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 SUGP1Q8IWZ8 645 aaKnown RBP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 SLC25A41Q8N5S1 370 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 NAT16Q8N8M0 369 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 DCAKDQ8WVC6 231 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 NXPE3Q969Y0 559 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 MTBPQ96DY7 904 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 MYO19Q96H55 970 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 CPNE1Q99829 537 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 TRMT61BQ9BVS5 477 aaKnown RBP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 TRABDQ9H4I3 376 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 ATP13A3Q9H7F0 1226 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 CHRAC1Q9NRG0 131 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 BCCIPQ9P287 314 aaKnown RBP eCLIP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 NOVA2Q9UNW9 492 aaKnown RBP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 USP15Q9Y4E8 981 aaPredicted RBP11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 COL4A2P08572 1712 aa11.12□□□□□ -0.63
PDE4DIP-247ENST00000618504 TTC24A2A3L6 582 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 A6NNZ2 444 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 ANKRD66B4E2M5 251 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 K7ERQ8 282 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 ARNTLO00327 626 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 TRAFD1O14545 582 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 SIN3BO75182 1162 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 GJB3O75712 270 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 KRT37O76014 449 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 KRT38O76015 456 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 PGLSO95336 258 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 POP4O95707 220 aaKnown RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 CRTAMO95727 393 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 PSMA3P25788 255 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 NMBRP28336 390 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 GJA4P35212 333 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 CTSOP43234 321 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 RECQLP46063 649 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 NUMBP49757 651 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 STK19P49842 368 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 CSE1LP55060 971 aaKnown RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 MAGOHP61326 146 aaKnown RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 ST8SIA6P61647 398 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 DNAJC3Q13217 504 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 HTR4Q13639 388 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 GALNT3Q14435 633 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 EFTUD2Q15029 972 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 TMED2Q15363 201 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 TAF1AQ15573 450 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 DLG2Q15700 870 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 ITPRIPL2Q3MIP1 535 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 TUBB8Q3ZCM7 444 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 DGKKQ5KSL6 1271 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 ATXN7L2Q5T6C5 722 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 TMEM215Q68D42 235 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 KCTD16Q68DU8 428 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 TRMT10BQ6PF06 316 aaKnown RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 KDM7AQ6ZMT4 941 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 GALNT7Q86SF2 657 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 KCNMB4Q86W47 210 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 RASSF3Q86WH2 238 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 C12orf40Q86WS4 652 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 CTAGE3PQ8IX95 158 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 PPM1NQ8N819 430 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 TERB1Q8NA31 727 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 CALML6Q8TD86 181 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 STYXQ8WUJ0 223 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 UCMAQ8WVF2 138 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 SCG3Q8WXD2 468 aaKnown RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 FGF14Q92915 247 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 MFSD3Q96ES6 412 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 LRIG1Q96JA1 1093 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 ZFYVE19Q96K21 471 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 RPL10LQ96L21 214 aaKnown RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 MRGPRX3Q96LB0 322 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 NSMCE3Q96MG7 304 aa11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 ZNF641Q96N77 438 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-247ENST00000618504 FCRL3Q96P31 734 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms