RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 EFCAB7A8K855 629 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 KPNA3O00505 521 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 INPP4BO15327 924 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 MED7O43513 233 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 DUX1O43812 170 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 HSF2BPO75031 334 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 TRUB2O95900 331 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 IVLP07476 585 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 RHOCP08134 193 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 KRT7P08729 469 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 HGFP14210 728 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CD58P19256 250 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 TRIM23P36406 574 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 EIF4A3P38919 411 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 GPD2P43304 727 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 NDST2P52849 883 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 PER3P56645 1201 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CDK17Q00537 523 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 GCNT1Q02742 428 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 AUHQ13825 339 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 MAP9Q49MG5 647 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 RESP18Q5W5W9 173 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 MMS22LQ6ZRQ5 1243 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 BPHLQ86WA6 291 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 NELFCDQ8IXH7 590 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CFAP52Q8N1V2 620 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CHST14Q8NCH0 376 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 OR52K2Q8NGK3 314 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 STARD8Q92502 1023 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 PNPLA2Q96AD5 504 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 TMX3Q96JJ7 454 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 REPIN1Q9BWE0 567 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 TRNAU1APQ9NX07 287 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 SEMA5BQ9P283 1151 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 VPS28Q9UK41 221 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 SMC3Q9UQE7 1217 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 KIF26BQ2KJY2 2108 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 SHANK1Q9Y566 2161 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 ASXL3Q9C0F0 2248 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CABIN1Q9Y6J0 2220 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 FAM221AA4D161 298 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 B4GAT1O43505 415 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 POP4O95707 220 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 RNF224P0DH78 156 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 UQCRFS1P47985 274 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CXCR3P49682 368 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CLCNKAP51800 687 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 PGDP52209 483 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 MAPK10P53779 464 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 HDAC4P56524 1084 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 SNX16P57768 344 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CYP4F2P78329 520 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 POM121L1PQ3SYA9 428 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 DPY19L3Q6ZPD9 716 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 NLRP8Q86W28 1048 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 TEX19Q8NA77 164 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 ATP11CQ8NB49 1132 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CXorf40AQ8TE69 158 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 PCMTD1Q96MG8 357 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 CLIC6Q96NY7 704 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 GPR87Q9BY21 358 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 GSDMCQ9BYG8 508 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 EXOC1Q9NV70 894 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 SLC39A1Q9NY26 324 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 LRIT1Q9P2V4 623 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 KCND3Q9UK17 655 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 HECTD1Q9ULT8 2610 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 TRPM6Q9BX84 2022 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 A0A1W2PQ67 120 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 PDE2AO00408 941 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 SEMA7AO75326 666 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 FAM155BO75949 473 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 F9P00740 461 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 C9P02748 559 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 KRT10P13645 584 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 LCP1P13796 627 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CTSEP14091 401 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 TCN2P20062 427 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CAPN3P20807 821 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 CCNHP51946 323 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 YWHAZP63104 245 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 IL11RAQ14626 422 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 LRRC14Q15048 493 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 INO80DQ53TQ3 878 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 ZFYVE27Q5T4F4 411 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 MANEALQ5VSG8 457 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 FOXR1Q6PIV2 292 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 KRBA2Q6ZNG9 492 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 FAM114A1Q8IWE2 563 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 C1orf131Q8NDD1 294 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 OR56A4Q8NGH8 313 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 NDRG1Q92597 394 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 INTS4Q96HW7 963 aaKnown RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 ZNF641Q96N77 438 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 FRMD8Q9BZ67 464 aaPredicted RBP4.62□□□□□ -1.67
SNCA-213ENST00000618500 LATS2Q9NRM7 1088 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 PCDHGC3Q9UN70 934 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 DOLKQ9UPQ8 538 aa4.62□□□□□ -1.67
SNCA-213ENST00000618500 TEX15Q9BXT5 2789 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms