RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 MFN2O95140 757 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 LDLRP01130 860 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 S100A1P23297 94 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 TKTP29401 623 aaKnown RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 OXTRP30559 389 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CDH5P33151 784 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 NR4A2P43354 598 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 RPS9P46781 194 aaKnown RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 ACADVLP49748 655 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CLCN3P51790 818 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 GJA9P57773 515 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SLC6A3Q01959 620 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 INAQ16352 499 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 IQSEC1Q6DN90 963 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SCIMPQ6UWF3 145 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 TMC5Q6UXY8 1006 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 C4orf22Q6V702 233 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 ERMP1Q7Z2K6 904 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 DSG4Q86SJ6 1040 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 C14orf80Q86SX3 495 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CMTR2Q8IYT2 770 aaKnown RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 CHPT1Q8WUD6 406 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 STARD8Q92502 1023 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 RNF34Q969K3 372 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 TUBGCP3Q96CW5 907 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CELF6Q96J87 481 aaKnown RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 QKIQ96PU8 341 aaKnown RBP eCLIP6.72□□□□□ -1.33
LMO3-235ENST00000616247 FTHL17Q9BXU8 183 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 MTMR10Q9NXD2 777 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SMPD3Q9NY59 655 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 UTP6Q9NYH9 597 aaKnown RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 ZNF70Q9UC06 446 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 GIT1Q9Y2X7 761 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 H2AFYO75367 372 aaKnown RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 DEAF1O75398 565 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 ATG7O95352 703 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 APOA4P06727 396 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 HOXC6P09630 235 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 KCNA2P16389 499 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 GRM5P41594 1212 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 GSSP48637 474 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 MRPS15P82914 257 aaKnown RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 LAMTOR4Q0VGL1 99 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 FOXD4Q12950 439 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 SLC13A2Q13183 592 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 NFYCQ13952 458 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 TAS2R42Q7RTR8 314 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 ERO1BQ86YB8 467 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CCDC103Q8IW40 242 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 ALDH16A1Q8IZ83 802 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CADM3Q8N126 398 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 ABHD11Q8NFV4 315 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 TMEM174Q8WUU8 243 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 KIF12Q96FN5 646 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SNX27Q96L92 541 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 TBCBQ99426 244 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 BAG5Q9UL15 447 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 PSME2Q9UL46 239 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 MAGED1Q9Y5V3 778 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 PTGDR2Q9Y5Y4 395 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 A0A0J9YYE9 177 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 FAM95CA0A1B0GW59 222 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 AURKAO14965 403 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 ZBTB24O43167 697 aaPredicted RBP6.71□□□□□ -1.33
LMO3-235ENST00000616247 SNAP91O60641 907 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 CILPO75339 1184 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 PMPCBO75439 489 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 NPR1P16066 1061 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 CYP3A5P20815 502 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 HOXA10P31260 410 aaPredicted RBP6.71□□□□□ -1.33
LMO3-235ENST00000616247 IDUAP35475 653 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 CAPGP40121 348 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 SP2Q02086 613 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 LAMC2Q13753 1193 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 MAPRE1Q15691 268 aaKnown RBP6.71□□□□□ -1.33
LMO3-235ENST00000616247 USP41Q3LFD5 358 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 TIGD2Q4W5G0 525 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 RABL3Q5HYI8 236 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 BROXQ5VW32 411 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 ARHGAP17Q68EM7 881 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 NCBP2-AS2Q69YL0 99 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 ABHD15Q6UXT9 468 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 CYP4V2Q6ZWL3 525 aaPredicted RBP6.71□□□□□ -1.33
LMO3-235ENST00000616247 SLC22A16Q86VW1 577 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 ZNF354CQ86Y25 554 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 ANKRD52Q8NB46 1076 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 KDM1BQ8NB78 822 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 TRUB1Q8WWH5 349 aaKnown RBP6.71□□□□□ -1.33
LMO3-235ENST00000616247 SNX19Q92543 992 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 GPRASP2Q96D09 838 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 CENPNQ96H22 339 aaPredicted RBP6.71□□□□□ -1.33
LMO3-235ENST00000616247 SPATA17Q96L03 361 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 CEP44Q9C0F1 390 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 CDHR5Q9HBB8 845 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 SPON1Q9HCB6 807 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 BTRCQ9Y297 605 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 CPQQ9Y646 472 aa6.71□□□□□ -1.33
LMO3-235ENST00000616247 H0Y858 1186 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 H3BMM5 538 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms