RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 HOOK3Q86VS8 718 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 MPP5Q8N3R9 675 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 CAMKK1Q8N5S9 505 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 PCDH20Q8N6Y1 951 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 CHST14Q8NCH0 376 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 MCUQ8NE86 351 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 IPMKQ8NFU5 416 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 OR52K1Q8NGK4 314 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 RPLP0P6Q8NHW5 317 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 PTPRN2Q92932 1015 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 ISG20Q96AZ6 181 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SMIM14Q96QK8 99 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 TRIB3Q96RU7 358 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 CEP44Q9C0F1 390 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 POLR1EQ9GZS1 481 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 TMEM245Q9H330 911 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SCUBE2Q9NQ36 999 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SLC8A2Q9UPR5 921 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 PCDHGC4Q9Y5F7 938 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 WASF2Q9Y6W5 498 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 NUMA1Q14980 2115 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 MYO15AQ9UKN7 3530 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 TBC1D3BA6NDS4 549 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 E7ESA3 106 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 TRAFD1O14545 582 aaPredicted RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 BNIP3LO60238 219 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 AVILO75366 819 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ANXA9O76027 345 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 AGTP01019 485 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 PRKCGP05129 697 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ATP5BP06576 529 aaKnown RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 CTSLP07711 333 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 PDHA1P08559 390 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ATXN1LP0C7T5 689 aaKnown RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 HNRNPLP14866 589 aaKnown RBP eCLIP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 HSPA9P38646 679 aaKnown RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 WASP42768 502 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ID4P47928 161 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 CSNK1DP48730 415 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 PXNP49023 591 aaPredicted RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 CCNHP51946 323 aaPredicted RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 METAP1P53582 386 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 MPP3Q13368 585 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ENPP2Q13822 863 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 PTPRRQ15256 657 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 SLC14A2Q15849 920 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ACCSLQ4AC99 568 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 DPY19L3Q6ZPD9 716 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 KDELC2Q7Z4H8 507 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 PCGF5Q86SE9 256 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ZSWIM9Q86XI8 627 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 IGDCC3Q8IVU1 814 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 STK40Q8N2I9 435 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 BBS5Q8N3I7 341 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ZCCHC9Q8N567 271 aaKnown RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 EIF1ADQ8N9N8 165 aaKnown RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 BBOF1Q8ND07 529 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 OR2AP1Q8NGE2 309 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 OR2A12Q8NGT7 310 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 GAB3Q8WWW8 586 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 ERLEC1Q96DZ1 483 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 GDAP1L1Q96MZ0 367 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 SERPINB12Q96P63 405 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 FMO2Q99518 471 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 TBL1YQ9BQ87 522 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 TRIM56Q9BRZ2 755 aaKnown RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 TDRD1Q9BXT4 1180 aaKnown RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 TXLNGYQ9BZA5 131 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 EPB41L4BQ9H329 900 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 LRRC40Q9H9A6 602 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 PLAC1Q9HBJ0 212 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 CASS4Q9NQ75 786 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 POLR3BQ9NW08 1133 aaPredicted RBP8.11□□□□□ -1.11
PCDH9-205ENST00000614931 CACNA2D2Q9NY47 1150 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 GMEB2Q9UKD1 530 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 RAB23Q9ULC3 237 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 EML5Q05BV3 1969 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 FAM186AA6NE01 2351 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 PLXNA2O75051 1894 aa8.11□□□□□ -1.11
PCDH9-205ENST00000614931 FRYLO94915 3013 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 LOC285095A0A1B0GVY8 99 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 E7EVH7 732 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 FZD6O60353 706 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 LRP3O75074 770 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 SIN3BO75182 1162 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 PPFIA2O75334 1257 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 IGSF6O95976 241 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 RETP07949 1114 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 SERPINF2P08697 491 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 PIRTP0C851 137 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 TPH1P17752 444 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 MGAT1P26572 445 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 TIE1P35590 1138 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 TNFRSF4P43489 277 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 LMAN1P49257 510 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 AP1S1P61966 158 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 SNRPD1P62314 119 aaKnown RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 CRADDP78560 199 aa8.1□□□□□ -1.11
PCDH9-205ENST00000614931 MRPS21P82921 87 aaKnown RBP8.1□□□□□ -1.11
PCDH9-205ENST00000614931 CAV1Q03135 178 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms