RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 TMEM151AQ8N4L1 468 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 RNF148Q8N7C7 305 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 PPP1R36Q96LQ0 422 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 UROC1Q96N76 676 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 UHRF1Q96T88 793 aaPredicted RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 CEP41Q9BYV8 373 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 COQ10BQ9H8M1 238 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 IARS2Q9NSE4 1012 aaKnown RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 NCKIPSDQ9NZQ3 722 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 CACNG4Q9UBN1 327 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 SARDHQ9UL12 918 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 SLC8A2Q9UPR5 921 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 HEATR9A2RTY3 570 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 CASTOR2A6NHX0 329 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 C9IYK1 514 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 EEF2KO00418 725 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 COQ9O75208 318 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 DAB1O75553 588 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 POMCP01189 267 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 PTPN1P18031 435 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 LHX1P48742 406 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 RAB15P59190 212 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 ESRRGP62508 458 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 SFSWAPQ12872 951 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 TMED1Q13445 227 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 TUSC3Q13454 348 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 USP10Q14694 798 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 GRM3Q14832 879 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 INTS6LQ5JSJ4 861 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 KCTD11Q693B1 232 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 LRRC8EQ6NSJ5 796 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 POTEHQ6S545 545 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 ISLR2Q6UXK2 745 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 ZNF554Q86TJ5 538 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 FNDC8Q8TC99 324 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 SLC2A14Q8TDB8 520 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 ATP6V1E2Q96A05 226 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 MFSD3Q96ES6 412 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 VAT1Q99536 393 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 HNRNPABQ99729 332 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 NPAS2Q99743 824 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 TMEM79Q9BSE2 394 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 ANKRD60Q9BZ19 345 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 CLK4Q9HAZ1 481 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 PLGRKTQ9HBL7 147 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 MRM3Q9HC36 420 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 PAK6Q9NQU5 681 aaPredicted RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 ZNHIT2Q9UHR6 403 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 PTBP2Q9UKA9 531 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 STAP1Q9ULZ2 295 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 FAF1Q9UNN5 650 aaPredicted RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 RUVBL2Q9Y230 463 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 ACOT9Q9Y305 439 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 RNF11Q9Y3C5 154 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 PCDHGA7Q9Y5G6 932 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 C7orf72A4D263 438 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 STX16-NPEPL1H3BU86 382 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 PSMD3O43242 534 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 EOMESO95936 686 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 SBK3P0C264 359 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 CD1EP15812 388 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 SELPP16109 830 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 IGFBP6P24592 240 aaPredicted RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 NOS2P35228 1153 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 BFSP2Q13515 415 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 SQLEQ14534 574 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 NRF1Q16656 503 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 TMEM198Q66K66 360 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 SLC24A5Q71RS6 500 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 LRRC8DQ7L1W4 858 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 PIWIL4Q7Z3Z4 852 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 ZC3HC1Q86WB0 502 aaKnown RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 DEFB106AQ8N104 65 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 LSMEM2Q8N112 164 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 BBS5Q8N3I7 341 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 FSTL5Q8N475 847 aaPredicted RBP11.3□□□□□ -0.6
ATF3-211ENST00000613954 C3orf58Q8NDZ4 430 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 GBA3Q9H227 469 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 CAAP1Q9H8G2 361 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 SPAG4Q9NPE6 437 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 RRN3Q9NYV6 651 aa11.3□□□□□ -0.6
ATF3-211ENST00000613954 hCG_2014768A0A024R1R8 64 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 TCRBV3S1A0A5B6 114 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 TARM1B6A8C7 271 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 KCNK1O00180 336 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 DCLK1O15075 740 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 HSPA8P11142 646 aaKnown RBP11.29□□□□□ -0.6
ATF3-211ENST00000613954 ODC1P11926 461 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 TCN1P20061 433 aaPredicted RBP11.29□□□□□ -0.6
ATF3-211ENST00000613954 MAGEA8P43361 318 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 SCNN1BP51168 640 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 GALK1P51570 392 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 DNAJB13P59910 316 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 FAM189BP81408 668 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 CDH17Q12864 832 aa11.29□□□□□ -0.6
ATF3-211ENST00000613954 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
ATF3-211ENST00000613954 PSMD5Q16401 504 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms