RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 KLC2Q9H0B6 622 aa8.61□□□□□ -1.03
CCL3-205ENST00000613928 ROPN1Q9HAT0 212 aaPredicted RBP8.61□□□□□ -1.03
CCL3-205ENST00000613928 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
CCL3-205ENST00000613928 COMMD8Q9NX08 183 aa8.61□□□□□ -1.03
CCL3-205ENST00000613928 PSD3Q9NYI0 1048 aa8.61□□□□□ -1.03
CCL3-205ENST00000613928 XPO7Q9UIA9 1087 aaKnown RBP8.61□□□□□ -1.03
CCL3-205ENST00000613928 NEU3Q9UQ49 428 aa8.61□□□□□ -1.03
CCL3-205ENST00000613928 TMEM82A0PJX8 343 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 GOLGA6L10A6NI86 522 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 SLC38A8A6NNN8 435 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 CHADO15335 359 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 EIF3HO15372 352 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCL3-205ENST00000613928 RTN3O95197 1032 aaPredicted RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 SEC24AO95486 1093 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 SOD2P04179 222 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 ABHD2P08910 425 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 ZDHHC11BP0C7U3 371 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 OR1D2P34982 312 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 ECI1P42126 302 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 GLUD2P49448 558 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 ARL4CP56559 192 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 GPX6P59796 221 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 RPL10AP62906 217 aaKnown RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 TFF2Q03403 129 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 TAF10Q12962 218 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 PPIGQ13427 754 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCL3-205ENST00000613928 PDK1Q15118 436 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 MANEALQ5VSG8 457 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 FOXB2Q5VYV0 432 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 CYP2R1Q6VVX0 501 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 KDM7AQ6ZMT4 941 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 CENPUQ71F23 418 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 BZW1Q7L1Q6 419 aaKnown RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 C16orf59Q7L2K0 433 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 C14orf80Q86SX3 495 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 CMTR2Q8IYT2 770 aaKnown RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 ARHGAP18Q8N392 663 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 COLGALT1Q8NBJ5 622 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 TFB1MQ8WVM0 346 aaKnown RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 KISS1RQ969F8 398 aaPredicted RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 FBXO32Q969P5 355 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 PGM2Q96G03 612 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 EXOC2Q96KP1 924 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 ZNF558Q96NG5 402 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 HAPLN3Q96S86 360 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 CLSTN3Q9BQT9 956 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 C1QTNF1Q9BXJ1 281 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 CENPHQ9H3R5 247 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCL3-205ENST00000613928 CLIC5Q9NZA1 410 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 BCCIPQ9P287 314 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCL3-205ENST00000613928 OR12D3Q9UGF7 316 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 ZNF281Q9Y2X9 895 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 MRPS23Q9Y3D9 190 aaKnown RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.6□□□□□ -1.03
CCL3-205ENST00000613928 GREB1Q4ZG55 1949 aa8.6□□□□□ -1.03
CCL3-205ENST00000613928 CLUHO75153 1309 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 PTPRSQ13332 1948 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 TRBV23OR9-2A0A075B6M9 112 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 SMIM23A6NLE4 172 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 RASGRF2O14827 1237 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 FGF10O15520 208 aaPredicted RBP8.59□□□□□ -1.03
CCL3-205ENST00000613928 DLX3O60479 287 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 TCEA3O75764 348 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 ABLIM3O94929 683 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 WNT11O96014 354 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 NR1D1P20393 614 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 EPHB2P29323 1055 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 HOXC13P31276 330 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 CCR1P32246 355 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 ACTN2P35609 894 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 SLCO1A2P46721 670 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 KCNQ1P51787 676 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 TBX4P57082 545 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 IFI35P80217 286 aaPredicted RBP8.59□□□□□ -1.03
CCL3-205ENST00000613928 DSG1Q02413 1049 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 GALNT2Q10471 571 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 AP1B1Q10567 949 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 WASHC5Q12768 1159 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 EFEMP1Q12805 493 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 LRP8Q14114 963 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 BTG3Q14201 252 aaPredicted RBP8.59□□□□□ -1.03
CCL3-205ENST00000613928 SF1Q15637 639 aaKnown RBP8.59□□□□□ -1.03
CCL3-205ENST00000613928 LONRF1Q17RB8 773 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 SKIDA1Q1XH10 827 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 DNAJC21Q5F1R6 531 aaKnown RBP8.59□□□□□ -1.03
CCL3-205ENST00000613928 FAM209AQ5JX71 171 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 ANKRD20A2Q5SQ80 823 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 TMEM240Q5SV17 173 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 SPOUT1Q5T280 376 aaKnown RBP8.59□□□□□ -1.03
CCL3-205ENST00000613928 SYCP2LQ5T4T6 812 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 ANKRD20A1Q5TYW2 823 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 ANKRD20A3Q5VUR7 823 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 C4orf22Q6V702 233 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 PDZD4Q76G19 769 aaPredicted RBP8.59□□□□□ -1.03
CCL3-205ENST00000613928 ZNF534Q76KX8 674 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 CROCCP2Q86T23 111 aa8.59□□□□□ -1.03
CCL3-205ENST00000613928 IGDCC3Q8IVU1 814 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms