RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 NPHS1O60500 1241 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 TIPRLO75663 272 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 TCF4P15884 667 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 MSX2P35548 267 aaPredicted RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 SLC25A11Q02978 314 aaKnown RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 ELAVL2Q12926 359 aaKnown RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 ZNF549Q6P9A3 640 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 DNAJC14Q6Y2X3 702 aaPredicted RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 GPRIN3Q6ZVF9 776 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 SPATA19Q7Z5L4 167 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 CCDC185Q8N715 623 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 GAD1Q99259 594 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 FAM126AQ9BYI3 521 aaPredicted RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 N4BP2Q86UW6 1770 aaPredicted RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 PDHXO00330 501 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 AOC1P19801 751 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 CYP2A7P20853 494 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 GLUD2P49448 558 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 HERC3Q15034 1050 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 RFX4Q33E94 735 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 HSDL1Q3SXM5 330 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 SLC39A4Q6P5W5 647 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 UNC5BQ8IZJ1 945 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 GLIS1Q8NBF1 620 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 OTULINQ96BN8 352 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 C19orf60Q96EN9 201 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 UROC1Q96N76 676 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 MTG1Q9BT17 334 aaPredicted RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 CHRAC1Q9NRG0 131 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 VPS45Q9NRW7 570 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 KLHL3Q9UH77 587 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 TEX264Q9Y6I9 313 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 ATP6AP2A0A1C7CYW4 349 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 ATP6AP2O75787 350 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 DGKAP23743 735 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 HTR7P34969 479 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 GPD2P43304 727 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 TTPAP49638 278 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 ANXA11P50995 505 aaKnown RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 WNT3AP56704 352 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 C1DQ13901 141 aaKnown RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 PPP1R15BQ5SWA1 713 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 KIAA0408Q6ZU52 694 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 LGI2Q8N0V4 545 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 GPC2Q8N158 579 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 LEMD2Q8NC56 503 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 SEPT8Q92599 483 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 LPGAT1Q92604 370 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 MYLPFQ96A32 169 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 CIB1Q99828 191 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 C6orf62Q9GZU0 229 aaPredicted RBP10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 FZD1Q9UP38 647 aa10.98□□□□□ -0.65
CDC42EP3-206ENST00000611976 RGPD5Q99666 1765 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 KCNU1A8MYU2 1149 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 MBL2P11226 248 aaPredicted RBP10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 MOGSQ13724 837 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 TRIM25Q14258 630 aaKnown RBP10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 REP15Q6BDI9 236 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 SATL1Q86VE3 508 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 ROPN1LQ96C74 230 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 ZMYM5Q9UJ78 669 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 DUSP12Q9UNI6 340 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 BTRCQ9Y297 605 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 GPR25O00155 361 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 CLDN5O00501 218 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 HOXA2O43364 376 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 FGF1P05230 155 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 CFHP08603 1231 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 SMIM10L2AP0DMW4 78 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 SMIM10L2BP0DMW5 78 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 SLC39A12Q504Y0 691 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 TXNRD3NBQ6F5E7 133 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 RETSATQ6NUM9 610 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 PPTC7Q8NI37 304 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 NXNL1Q96CM4 212 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 PAWRQ96IZ0 340 aaKnown RBP10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 PANX3Q96QZ0 392 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 PLK2Q9NYY3 685 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 FADS3Q9Y5Q0 445 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 LAMA4Q16363 1823 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 GNG14A0A1W2PPG7 69 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 SLC22A3O75751 556 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 ARIH2O95376 493 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 HSMCR30P0CW71 290 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 JAK1P23458 1154 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 RPL9P32969 192 aaKnown RBP10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 NOVP48745 357 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 ZIK1Q3SY52 487 aaPredicted RBP10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 NETO2Q8NC67 525 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 EZH1Q92800 747 aaPredicted RBP10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 REEP1Q9H902 201 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 DTLQ9NZJ0 730 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 FZD10Q9ULW2 581 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 TSPAN8P19075 237 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 NCF4Q15080 339 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 MAPKAPK3Q16644 382 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 INO80DQ53TQ3 878 aaPredicted RBP10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 OR52K2Q8NGK3 314 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 SKA1Q96BD8 255 aa10.97□□□□□ -0.65
CDC42EP3-206ENST00000611976 TBCDQ9BTW9 1192 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms