RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 DIAPH2O60879 1101 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 ABLIM3O94929 683 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 KPNA2P52292 529 aaKnown RBP28.24■■■□□ 2.11
CSPG5-205ENST00000610462 LAMB3Q13751 1172 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 IKBKEQ14164 716 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 CFAP157Q5JU67 520 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 CILP2Q8IUL8 1156 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 LMNTD2Q8IXW0 634 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 ARHGAP24Q8N264 748 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 BBS5Q8N3I7 341 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 HDAC10Q969S8 669 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 SAGE1Q9NXZ1 904 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 COL4A6Q14031 1691 aa28.24■■■□□ 2.11
CSPG5-205ENST00000610462 IL31Q6EBC2 164 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 PTAR1Q7Z6K3 402 aaPredicted RBP28.23■■■□□ 2.11
CSPG5-205ENST00000610462 RBM15BQ8NDT2 890 aaKnown RBP28.23■■■□□ 2.11
CSPG5-205ENST00000610462 OR52K2Q8NGK3 314 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 MYRFLQ96LU7 910 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 MRPL46Q9H2W6 279 aaKnown RBP28.23■■■□□ 2.11
CSPG5-205ENST00000610462 EPB41L3Q9Y2J2 1087 aaPredicted RBP28.23■■■□□ 2.11
CSPG5-205ENST00000610462 DLX3O60479 287 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 NUMBP49757 651 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 ARSDP51689 593 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 RPS24P62847 133 aaKnown RBP28.23■■■□□ 2.11
CSPG5-205ENST00000610462 PRAMEP78395 509 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 OR6P1Q8NGX9 317 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 PRICKLE1Q96MT3 831 aaPredicted RBP28.23■■■□□ 2.11
CSPG5-205ENST00000610462 MRPL57Q9BQC6 102 aaKnown RBP28.23■■■□□ 2.11
CSPG5-205ENST00000610462 MGME1Q9BQP7 344 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 RNF208Q9H0X6 261 aa28.23■■■□□ 2.11
CSPG5-205ENST00000610462 CLDN11O75508 207 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 STC2O76061 302 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 SOD2P04179 222 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 CHRNGP07510 517 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 SERPINF2P08697 491 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 PGM1P36871 562 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 HK2P52789 917 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 ACVR1Q04771 509 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 ASPHQ12797 758 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 TPGS2Q68CL5 300 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 FBXO27Q8NI29 283 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 HEXDCQ8WVB3 486 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 PEX13Q92968 403 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 TSPAN17Q96FV3 270 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 NUDCD1Q96RS6 583 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 NDNQ99608 321 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 OLFM1Q99784 485 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 SEPT3Q9UH03 358 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 KCTD3Q9Y597 815 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 KDELR3O43731 214 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 MAGEC1O60732 1142 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 ANP32DO95626 131 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 KLKB1P03952 638 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 CCL5P13501 91 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 CORO1AP31146 461 aaKnown RBP28.22■■■□□ 2.11
CSPG5-205ENST00000610462 NAGLUP54802 743 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 TLE2Q04725 743 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 CNKSR3Q6P9H4 555 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 SPATA6LQ8N4H0 392 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 TTC8Q8TAM2 541 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 C1orf21Q9H246 121 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 CYP4F11Q9HBI6 524 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 IGSF5Q9NSI5 407 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 NKX1-2Q9UD57 310 aaPredicted RBP28.22■■■□□ 2.11
CSPG5-205ENST00000610462 ANAPC1Q9H1A4 1944 aa28.22■■■□□ 2.11
CSPG5-205ENST00000610462 ENTPD5O75356 428 aa28.21■■■□□ 2.11
CSPG5-205ENST00000610462 MPSTP25325 297 aa28.21■■■□□ 2.11
CSPG5-205ENST00000610462 SLC14A2Q15849 920 aa28.21■■■□□ 2.11
CSPG5-205ENST00000610462 DNAL1Q4LDG9 190 aa28.21■■■□□ 2.11
CSPG5-205ENST00000610462 ENDOVQ8N8Q3 282 aaKnown RBP28.21■■■□□ 2.11
CSPG5-205ENST00000610462 MOCOSQ96EN8 888 aa28.21■■■□□ 2.11
CSPG5-205ENST00000610462 GKN1Q9NS71 199 aa28.21■■■□□ 2.11
CSPG5-205ENST00000610462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP28.21■■■□□ 2.11
CSPG5-205ENST00000610462 UBA2Q9UBT2 640 aaPredicted RBP28.21■■■□□ 2.11
CSPG5-205ENST00000610462 YIPF1Q9Y548 306 aa28.21■■■□□ 2.11
CSPG5-205ENST00000610462 PIGNO95427 931 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 ALDH1A3P47895 512 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 OXCT1P55809 520 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 TRIM60Q495X7 471 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 ARL13AQ5H913 290 aaPredicted RBP28.2■■■□□ 2.11
CSPG5-205ENST00000610462 TMC7Q7Z402 723 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 TOX2Q96NM4 488 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 SPON2Q9BUD6 331 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 PLA2G4CQ9UP65 541 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 ACTL7AQ9Y615 435 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 BPTFQ12830 3046 aa28.2■■■□□ 2.11
CSPG5-205ENST00000610462 CCL22O00626 93 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 S1PR4O95977 384 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 LMNAP02545 664 aaKnown RBP28.2■■■□□ 2.1
CSPG5-205ENST00000610462 RPL14P50914 215 aaKnown RBP28.2■■■□□ 2.1
CSPG5-205ENST00000610462 RAP1GDS1P52306 607 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 DSG1Q02413 1049 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 PRKAA1Q13131 559 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 GALNT3Q14435 633 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 FAM83EQ2M2I3 478 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 SLC9B1Q4ZJI4 515 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 SPOUT1Q5T280 376 aaKnown RBP28.2■■■□□ 2.1
CSPG5-205ENST00000610462 HECTD2Q5U5R9 776 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 CHST9Q7L1S5 443 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 MAPK15Q8TD08 544 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms