RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 NCKIPSDQ9NZQ3 722 aa1.7□□□□□ -2.14
SNORA28-201ENST00000606769 MPP6Q9NZW5 540 aa1.7□□□□□ -2.14
SNORA28-201ENST00000606769 AASSQ9UDR5 926 aa1.7□□□□□ -2.14
SNORA28-201ENST00000606769 SLCO3A1Q9UIG8 710 aa1.7□□□□□ -2.14
SNORA28-201ENST00000606769 A4GNTQ9UNA3 340 aa1.7□□□□□ -2.14
SNORA28-201ENST00000606769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.7□□□□□ -2.14
SNORA28-201ENST00000606769 NFE2L3Q9Y4A8 694 aa1.7□□□□□ -2.14
SNORA28-201ENST00000606769 LSM4Q9Y4Z0 139 aaKnown RBP1.7□□□□□ -2.14
SNORA28-201ENST00000606769 INSL5Q9Y5Q6 135 aa1.7□□□□□ -2.14
SNORA28-201ENST00000606769 RUSC2Q8N2Y8 1516 aa1.7□□□□□ -2.14
SNORA28-201ENST00000606769 A0A096LPK6 155 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PGPEP1LA6NFU8 196 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 B4DGG1 531 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 F5H0A9 414 aaPredicted RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 CHL1O00533 1208 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 SPRY3O43610 288 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 DOK2O60496 412 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 BAIAP3O94812 1187 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 OR2C1O95371 312 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 NTN1O95631 604 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 FTCDO95954 541 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 TFP02787 698 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 TMEM191BP0C7N4 346 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 ENO3P13929 434 aaPredicted RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PLA2G2AP14555 144 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 ZNF12P17014 697 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PTPN2P17706 415 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 ITGB8P26012 769 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 MAN1A1P33908 653 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 RFC1P35251 1148 aaPredicted RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 KRT9P35527 623 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 DDIT3P35638 169 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PIGAP37287 484 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PAFAH1B1P43034 410 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 GPR12P47775 334 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 RFX2P48378 723 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 NANOS2P60321 138 aaKnown RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 KRTAP10-11P60412 298 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 ZP1P60852 638 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 RPS3AP61247 264 aaKnown RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PPATQ06203 517 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 DCTN2Q13561 401 aaKnown RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 FGFBP1Q14512 234 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 KRT32Q14532 448 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 SHBQ15464 509 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 TAF11Q15544 211 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 COL28A1Q2UY09 1125 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 EDRF1Q3B7T1 1238 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 SLC45A4Q5BKX6 768 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PXDC1Q5TGL8 231 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 FAM69BQ5VUD6 431 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 CCDC30Q5VVM6 783 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 CCDC129Q6ZRS4 1044 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 NEK10Q6ZWH5 1172 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 RSRC2Q7L4I2 434 aaKnown RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 SLC46A3Q7Z3Q1 461 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 FAM185AQ8N0U4 392 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 TMEM199Q8N511 208 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PARP16Q8N5Y8 322 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PPHLN1Q8NEY8 458 aaKnown RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 RNF183Q96D59 192 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 UBA5Q9GZZ9 404 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 FAM234AQ9H0X4 552 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 TASP1Q9H6P5 420 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 MKKSQ9NPJ1 570 aaPredicted RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 SMC4Q9NTJ3 1288 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 BABAM1Q9NWV8 329 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 TAS2R10Q9NYW0 307 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 ORC3Q9UBD5 711 aaPredicted RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 SUFUQ9UMX1 484 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 SLC45A1Q9Y2W3 748 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 PTGDR2Q9Y5Y4 395 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 TDRD9Q8NDG6 1382 aaKnown RBP1.69□□□□□ -2.14
SNORA28-201ENST00000606769 TTC3P53804 2025 aa1.69□□□□□ -2.14
SNORA28-201ENST00000606769 CACNA1IQ9P0X4 2223 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 ARHGEF40Q8TER5 1519 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 IGHV4-28A0A0C4DH34 117 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 CPED1A4D0V7 1026 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 PI4KAP2A4QPH2 592 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 CD8B2A6NJW9 211 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 AGAP14A8MT82 685 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 TSPAN4O14817 238 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 WNT9BO14905 357 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 HSPA12AO43301 675 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 SEC14L5O43304 696 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 ATP2C2O75185 946 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 GJB3O75712 270 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 RGS11O94810 467 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 DDX58O95786 925 aaKnown RBP1.68□□□□□ -2.14
SNORA28-201ENST00000606769 CYC1P08574 325 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 LAMP2P13473 410 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 ETFAP13804 333 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 SLC2A4P14672 509 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 ZNF8P17098 575 aaPredicted RBP1.68□□□□□ -2.14
SNORA28-201ENST00000606769 CDAP32320 146 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 PTGER1P34995 402 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 HADHAP40939 763 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 UBA7P41226 1012 aa1.68□□□□□ -2.14
SNORA28-201ENST00000606769 PIP4K2AP48426 406 aaPredicted RBP1.68□□□□□ -2.14
SNORA28-201ENST00000606769 PDLIM4P50479 330 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms