RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SLC47A1Q96FL8 570 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 SENP6Q9GZR1 1112 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 DHRS7Q9Y394 339 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 MGRN1O60291 552 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PPM1BO75688 479 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 MICAL2O94851 1124 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 FGFR1P11362 822 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CDH17Q12864 832 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 C12orf56Q8IXR9 622 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 SLC39A3Q9BRY0 314 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 SLC35C2Q9NQQ7 365 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ADPRHL2Q9NX46 363 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GRHL1Q9NZI5 618 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 USP31Q70CQ4 1352 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 TMEM150BA6NC51 233 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GPR182O15218 404 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 TCF4P15884 667 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 NFIAQ12857 509 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 FAPQ12884 760 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PDIA6Q15084 440 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GRTP1Q5TC63 336 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF438Q7Z4V0 828 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 DNAJB14Q8TBM8 379 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CXorf21Q9HAI6 301 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 HPF1Q9NWY4 346 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 MORF4L1Q9UBU8 362 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PSMD13Q9UNM6 376 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 HPSEQ9Y251 543 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CRYL1Q9Y2S2 319 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CEP170BQ9Y4F5 1589 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 BCLAF3A2AJT9 711 aaKnown RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 M0R036 132 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PGK1P00558 417 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 HMGCRP04035 888 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ASLP04424 464 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ACAT1P24752 427 aaKnown RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PDK4Q16654 411 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 FBXO47Q5MNV8 452 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 MTSS1LQ765P7 747 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 IQCF2Q8IXL9 164 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PIK3C3Q8NEB9 887 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PIH1D2Q8WWB5 315 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 REXO5Q96IC2 774 aaKnown RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 NSMCE3Q96MG7 304 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 APBA2Q99767 749 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 SEC22BO75396 215 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ANXA6P08133 673 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 OR1E1P30953 314 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GLT6D1Q7Z4J2 308 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 MCOLN3Q8TDD5 553 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 A0A096LPK6 155 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 MAGEB16A2A368 324 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 BCKDKO14874 412 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 AP2A2O94973 939 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 IFNA16P05015 189 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 SERPINF2P08697 491 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GTF2E2P29084 291 aaKnown RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CRABP2P29373 138 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PFKFB4Q16877 469 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 PWWP2AQ96N64 755 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ATXN3LQ9H3M9 355 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 KCND1Q9NSA2 647 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CD163L1Q9NR16 1453 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GJB6O95452 261 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 USP17L7P0C7H9 530 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 DNAJB2P25686 324 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CAPGP40121 348 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 IL27RAQ6UWB1 636 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CDYL2Q8N8U2 506 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CIB1Q99828 191 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 SLC6A15Q9H2J7 730 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 DNPEPQ9ULA0 475 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 IFRD1O00458 451 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 BTN3A1O00481 513 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 RFX5P48382 616 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 LHX1P48742 406 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 TBX4P57082 545 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF621Q6ZSS3 439 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 NMRAL1Q9HBL8 299 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 VPS45Q9NRW7 570 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ISPDA4D126 451 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 KCNK1O00180 336 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ATP5BP06576 529 aaKnown RBP8.75□□□□□ -1.01
CSMD1-216ENST00000602557 FMO4P31512 558 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 HNF4AP41235 474 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 BTBD16Q32M84 506 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GATAD2BQ8WXI9 593 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 AP3S1Q92572 193 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 SPON1Q9HCB6 807 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ZSCAN5DPP0CG00 497 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GTF2A2P52657 109 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ACOX1Q15067 660 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 DOK6Q6PKX4 331 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 MFSD7Q6UXD7 560 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GK5Q6ZS86 529 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 AHSA2Q719I0 299 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 ADGRA1Q86SQ6 560 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 CLIP4Q8N3C7 705 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 GMCL1P1Q8NEA9 526 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 POLE4Q9NR33 117 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms