RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	MFSD11	O43934	449 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	MMP20	O60882	483 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	THEGL	P0DJG4	465 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	COMT	P21964	271 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	CCNC	P24863	283 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	PML	P29590	882 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	CDC25B	P30305	580 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	MMP13	P45452	471 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	NOP2	P46087	812 aa	Known RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	ARRB1	P49407	418 aa	Predicted RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	CLDN2	P57739	230 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	POLR2L	P62875	67 aa	Known RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	SIM1	P81133	766 aa	Predicted RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	GBE1	Q04446	702 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	ELP6	Q0PNE2	266 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	SLC10A2	Q12908	348 aa	Predicted RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	ZNF235	Q14590	738 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	IFI16	Q16666	785 aa	Known RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	RALGPS1	Q5JS13	557 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	LRRC73	Q5JTD7	316 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	ERAP2	Q6P179	960 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	ZSWIM9	Q86XI8	627 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	DCP2	Q8IU60	420 aa	Known RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	BBS5	Q8N3I7	341 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	OXR1	Q8N573	874 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	OR13H1	Q8NG92	308 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	RHBDD1	Q8TEB9	315 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	SAP25	Q8TEE9	199 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	MAML1	Q92585	1016 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	FATE1	Q969F0	183 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	CENPT	Q96BT3	561 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	NUDCD1	Q96RS6	583 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	MYOC	Q99972	504 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	MGME1	Q9BQP7	344 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	PCDH12	Q9NPG4	1184 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	DDX56	Q9NY93	547 aa	Known RBP	13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	IMPACT	Q9P2X3	320 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	HYOU1	Q9Y4L1	999 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	PCDHB9	Q9Y5E1	797 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517	PLXNA2	O75051	1894 aa		13.59	□□□□□ -0.23
ARHGEF1-222	ENST00000600517		A0A1W2PQ67	120 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TTC24	A2A3L6	582 aa	Predicted RBP	13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CFAP69	A5D8W1	941 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	POM121B	A6NF01	834 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517		A6NNZ2	444 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	MX2	P20592	715 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	GRK6	P43250	576 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CFAP58	Q5T655	872 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	SLC9A4	Q6AI14	798 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TIGD7	Q6NT04	549 aa	Predicted RBP	13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	RAD9B	Q6WBX8	426 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517		Q6ZSR6	202 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	GLRX5	Q86SX6	157 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	DENND6B	Q8NEG7	585 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CXorf40A	Q8TE69	158 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CDC6	Q99741	560 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	NOD2	Q9HC29	1040 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	GPR27	Q9NS67	375 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	DTL	Q9NZJ0	730 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	AMACR	Q9UHK6	382 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TFR2	Q9UP52	801 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	BTBD3	Q9Y2F9	522 aa		13.58	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	PCNX2	A6NKB5	2137 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	RCCD1	A6NED2	376 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	FPGT	O14772	594 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	HTRA2	O43464	458 aa	Predicted RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	SPOP	O43791	374 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	SOCS5	O75159	536 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TM7SF2	O76062	418 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	MAP3K6	O95382	1288 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	KRT1	P04264	644 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	ZFX	P17010	805 aa	Predicted RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	EPHA8	P29322	1005 aa	Predicted RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	IL9R	Q01113	521 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	BNIP3	Q12983	259 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	AGER	Q15109	404 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TAZ	Q16635	292 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	C11orf63	Q6NUN7	778 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	KYAT3	Q6YP21	454 aa	Known RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	PLD5	Q8N7P1	536 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	RNF25	Q96BH1	459 aa	Predicted RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	IFT43	Q96FT9	208 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CALR3	Q96L12	384 aa	Known RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	BAG1	Q99933	345 aa	Predicted RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	WRAP53	Q9BUR4	548 aa	Known RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	MAK16	Q9BXY0	300 aa	Known RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	SCUBE2	Q9NQ36	999 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	SALL4	Q9UJQ4	1053 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	ATP8A1	Q9Y2Q0	1164 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	REXO2	Q9Y3B8	237 aa	Known RBP	13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	PCDHGC4	Q9Y5F7	938 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CABIN1	Q9Y6J0	2220 aa		13.57	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CHD8	Q9HCK8	2581 aa		13.56	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	PSTPIP1	O43586	416 aa		13.56	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	IPO7	O95373	1038 aa	Known RBP	13.56	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	ITGAV	P06756	1048 aa		13.56	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TNNT1	P13805	278 aa		13.56	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CCNB1	P14635	433 aa		13.56	□□□□□ -0.24

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