RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RGRP47804 291 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 DGKGP49619 791 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 VASPP50552 380 aaPredicted RBP13.6□□□□□ -0.23
VMP1-217ENST00000593168 FAM193AP78312 1265 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 CSTF1Q05048 431 aaKnown RBP13.6□□□□□ -0.23
VMP1-217ENST00000593168 MTM1Q13496 603 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 OLIG2Q13516 323 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 UBXN2BQ14CS0 331 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 FUT11Q495W5 492 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 SLC44A4Q53GD3 710 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 HSP90B2PQ58FF3 399 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 CYS1Q717R9 158 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 ADIPOR2Q86V24 386 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 ETFBKMTQ8IXQ9 262 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 CPA6Q8N4T0 437 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 NAT16Q8N8M0 369 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 OR2W6PQ8NHA6 318 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 ISG20Q96AZ6 181 aaKnown RBP13.6□□□□□ -0.23
VMP1-217ENST00000593168 FEM1CQ96JP0 617 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 ZFYVE19Q96K21 471 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 KXD1Q9BQD3 176 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 FSD1LQ9BXM9 530 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 PLA2G2FQ9BZM2 168 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 PPCSQ9HAB8 311 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 NOD2Q9HC29 1040 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 HPS4Q9NQG7 708 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 KIF26AQ9ULI4 1882 aaPredicted RBP13.6□□□□□ -0.23
VMP1-217ENST00000593168 MAD1L1Q9Y6D9 718 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 CACNA1BQ00975 2339 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 TTC24A2A3L6 582 aaPredicted RBP13.59□□□□□ -0.23
VMP1-217ENST00000593168 FAM170BA6NMN3 283 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 TULP3O75386 442 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 SYF2O95926 243 aaKnown RBP13.59□□□□□ -0.23
VMP1-217ENST00000593168 IVLP07476 585 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 SRCP12931 536 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 PGAM1P18669 254 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 POLR2EP19388 210 aaKnown RBP13.59□□□□□ -0.23
VMP1-217ENST00000593168 HLA-DPA1P20036 260 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 SCNN1BP51168 640 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 RHOAP61586 193 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 AP1S1P61966 158 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 ECT2LQ008S8 904 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 PRKCQQ04759 706 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 CDK18Q07002 472 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 RUNX3Q13761 415 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 PCSK7Q16549 785 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 GAB4Q2WGN9 574 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 STEAP4Q687X5 459 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 MBLAC2Q68D91 279 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 NCEH1Q6PIU2 408 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 SRLQ86TD4 932 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 MPP5Q8N3R9 675 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 GOLGA6L1Q8N7Z2 621 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 UHMK1Q8TAS1 419 aaKnown RBP13.59□□□□□ -0.23
VMP1-217ENST00000593168 GSDMBQ8TAX9 411 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 PTCD2Q8WV60 388 aaKnown RBP13.59□□□□□ -0.23
VMP1-217ENST00000593168 APOL2Q9BQE5 337 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 CEP44Q9C0F1 390 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 LTB4R2Q9NPC1 389 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 SYBUQ9NX95 663 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 FETUBQ9UGM5 382 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 RABGEF1Q9UJ41 708 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 SLC25A13Q9UJS0 675 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 FCF1Q9Y324 198 aaKnown RBP13.59□□□□□ -0.23
VMP1-217ENST00000593168 ZFHX4Q86UP3 3567 aa13.59□□□□□ -0.23
VMP1-217ENST00000593168 EPG5Q9HCE0 2579 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 FAM237BA0A1B0GVD1 139 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 TCRBV9S1A1TA0A576 114 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 GOLGA6L10A6NI86 522 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 K7ERQ8 282 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 RASGRF2O14827 1237 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 SMAD6O43541 496 aaKnown RBP13.58□□□□□ -0.24
VMP1-217ENST00000593168 LILRB5O75023 590 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 ZNF821O75541 412 aaPredicted RBP13.58□□□□□ -0.24
VMP1-217ENST00000593168 NDST3O95803 873 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 ASLP04424 464 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 MYZAPP0CAP1 466 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 TPH1P17752 444 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 STX2P32856 288 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 MAPK8P45983 427 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 FRG1Q14331 258 aaKnown RBP13.58□□□□□ -0.24
VMP1-217ENST00000593168 SLC1A5Q15758 541 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 GEN1Q17RS7 908 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 KLHL38Q2WGJ6 581 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 PCID2Q5JVF3 399 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 CERCAMQ5T4B2 595 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 CASC4Q6P4E1 433 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 TSSK4Q6SA08 328 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 UNC5AQ6ZN44 842 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 TMEM135Q86UB9 458 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 PLPP6Q8IY26 295 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 SH2D3CQ8N5H7 860 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 PCDH20Q8N6Y1 951 aaKnown RBP13.58□□□□□ -0.24
VMP1-217ENST00000593168 ZBTB44Q8NCP5 570 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 NELL1Q92832 810 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 IFT43Q96FT9 208 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 CFAP36Q96G28 342 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 EXOC2Q96KP1 924 aa13.58□□□□□ -0.24
VMP1-217ENST00000593168 TRIB3Q96RU7 358 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms