RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 LEFTY1O75610 366 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 THEGLP0DJG4 465 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 HOXB3P14651 431 aaPredicted RBP18.21■□□□□ 0.51
VAT1-208ENST00000590924 JUPP14923 745 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 AKT2P31751 481 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 ETFBP38117 255 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 NEK3P51956 506 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 CDH6P55285 790 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 ATP13A4Q4VNC1 1196 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 TMEM259Q4ZIN3 620 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 PPP6R3Q5H9R7 873 aaPredicted RBP18.21■□□□□ 0.51
VAT1-208ENST00000590924 RFX8Q6ZV50 586 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 RTL3Q8N8U3 475 aaKnown RBP18.21■□□□□ 0.51
VAT1-208ENST00000590924 KLK6Q92876 244 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 NXPE2Q96DL1 559 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 MYOCQ99972 504 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 SPON2Q9BUD6 331 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 FZD3Q9NPG1 666 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 LOC400499M0QZD8 3231 aa18.21■□□□□ 0.51
VAT1-208ENST00000590924 CCDC66A2RUB6 948 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 DAPK3O43293 454 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 SDC3O75056 442 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 PALMO75781 387 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 PCDH8O95206 1070 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 KDELR1P24390 212 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 IL4RP24394 825 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 ACP1P24666 158 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 ITGB7P26010 798 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 CTNNA2P26232 953 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 YBEYP58557 167 aaPredicted RBP18.2■□□□□ 0.5
VAT1-208ENST00000590924 KRT81Q14533 505 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 PROX2Q3B8N5 592 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 HES3Q5TGS1 186 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 ABI3BPQ7Z7G0 1075 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 PDZD3Q86UT5 571 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 NT5DC3Q86UY8 548 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 LZTR1Q8N653 840 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 FAM174AQ8TBP5 190 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 HEPHQ9BQS7 1158 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 ZNF670Q9BS34 389 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 MAGEH1Q9H213 219 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 LZTFL1Q9NQ48 299 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 KLHL11Q9NVR0 708 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 PCDHA3Q9Y5H8 950 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 BAHCC1Q9P281 2608 aa18.2■□□□□ 0.5
VAT1-208ENST00000590924 A0A087WV48 116 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 MIF4GDA9UHW6 222 aaKnown RBP18.19■□□□□ 0.5
VAT1-208ENST00000590924 ADRB3P13945 408 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 DGKAP23743 735 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 CTNNA1P35221 906 aaKnown RBP18.19■□□□□ 0.5
VAT1-208ENST00000590924 CCNHP51946 323 aaPredicted RBP18.19■□□□□ 0.5
VAT1-208ENST00000590924 RP1P56715 2156 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 CLDN6P56747 220 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 ZNF211Q13398 564 aaPredicted RBP18.19■□□□□ 0.5
VAT1-208ENST00000590924 DPYSQ14117 519 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 DPYSL3Q14195 570 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 CARD16Q5EG05 197 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 SEL1L3Q68CR1 1132 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 KIAA1161Q6NSJ0 714 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 GCNT7Q6ZNI0 430 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 PEX26Q7Z412 305 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 ZSCAN30Q86W11 494 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 REXO1L1PQ8IX06 675 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 PLPP6Q8IY26 295 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 KATNAL2Q8IYT4 538 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 RCOR2Q8IZ40 523 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 CACTIN-AS1Q8N1I8 211 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 UMODL1-AS1Q8N2C9 162 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 SLC25A45Q8N413 288 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 TRIM58Q8NG06 486 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 OR13H1Q8NG92 308 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 ISG20Q96AZ6 181 aaKnown RBP18.19■□□□□ 0.5
VAT1-208ENST00000590924 FAF2Q96CS3 445 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 IFT43Q96FT9 208 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 CSPG4P5Q96PW8 444 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 GOLPH3Q9H4A6 298 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 HYOU1Q9Y4L1 999 aa18.19■□□□□ 0.5
VAT1-208ENST00000590924 PTPRQQ9UMZ3 2332 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 FASNP49327 2511 aaKnown RBP18.18■□□□□ 0.5
VAT1-208ENST00000590924 GOLGA6L9A6NEM1 432 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 TRIM38O00635 465 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 SIGLEC6O43699 453 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 AP1G1O43747 822 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 ZRANB2O95218 330 aaKnown RBP eCLIP18.18■□□□□ 0.5
VAT1-208ENST00000590924 CD160O95971 181 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 ERCC2P18074 760 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 GJC1P36383 396 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 NDST2P52849 883 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 GEMIN4P57678 1058 aaKnown RBP18.18■□□□□ 0.5
VAT1-208ENST00000590924 ODF2Q5BJF6 829 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 ZFYVE27Q5T4F4 411 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 SLC22A18ASQ8N1D0 253 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 OR4C6Q8NH72 309 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 EXD1Q8NHP7 514 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 HNRNPLLQ8WVV9 542 aaKnown RBP18.18■□□□□ 0.5
VAT1-208ENST00000590924 RAPGEF5Q92565 580 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 ALS2CR12Q96Q35 445 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 CALN1Q9BXU9 219 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 GPR27Q9NS67 375 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms