RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CFAP58Q5T655 872 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 KCTD11Q693B1 232 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 ANO7Q6IWH7 933 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 FBXL19Q6PCT2 694 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 KDELC1Q6UW63 502 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 KIAA1324Q6UXG2 1013 aaKnown RBP12.27□□□□□ -0.45
DNMT1-218ENST00000589294 RANBP10Q6VN20 620 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 ERN2Q76MJ5 926 aaKnown RBP12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PCGF5Q86SE9 256 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PRUNE1Q86TP1 453 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 TTC7BQ86TV6 843 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 JAMLQ86YT9 394 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 MAML2Q8IZL2 1156 aaPredicted RBP12.27□□□□□ -0.45
DNMT1-218ENST00000589294 HDDC3Q8N4P3 179 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 MDGA1Q8NFP4 955 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 FAM131CQ96AQ9 280 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 ERLEC1Q96DZ1 483 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 IFT43Q96FT9 208 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 FEM1CQ96JP0 617 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 OMDQ99983 421 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 CARD6Q9BX69 1037 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 TDRD1Q9BXT4 1180 aaKnown RBP12.27□□□□□ -0.45
DNMT1-218ENST00000589294 FBXL12Q9NXK8 326 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 UBP1Q9NZI7 540 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 USP36Q9P275 1121 aaKnown RBP12.27□□□□□ -0.45
DNMT1-218ENST00000589294 FZD4Q9ULV1 537 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PHTF1Q9UMS5 762 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PPIL1Q9Y3C6 166 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PCDHB9Q9Y5E1 797 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 ANKRD66B4E2M5 251 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 E7EVH7 732 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 AXIN1O15169 862 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 TTI1O43156 1089 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 SUN1O94901 812 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 AP2A1O95782 977 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 NDST3O95803 873 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 PRLP01236 227 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 TDGF1P13385 188 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 ADRA1AP35348 466 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 DRD3P35462 400 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 MAGEA6P43360 314 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 TPMTP51580 245 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 NEK3P51956 506 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 CSTF1Q05048 431 aaKnown RBP12.26□□□□□ -0.45
DNMT1-218ENST00000589294 CNTN1Q12860 1018 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 TRIP13Q15645 432 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-218ENST00000589294 UGP2Q16851 508 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-218ENST00000589294 LINC00523Q86TU6 105 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 AADATQ8N5Z0 425 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 PAF1Q8N7H5 531 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 GANCQ8TET4 914 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 PDCD6IPQ8WUM4 868 aaKnown RBP12.26□□□□□ -0.45
DNMT1-218ENST00000589294 PIH1D2Q8WWB5 315 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 ARRDC3Q96B67 414 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 SCRN2Q96FV2 425 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 MRGPRX2Q96LB1 330 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 TRIB3Q96RU7 358 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 SRPK1Q96SB4 655 aaKnown RBP12.26□□□□□ -0.45
DNMT1-218ENST00000589294 GORASP1Q9BQQ3 440 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 ERP44Q9BS26 406 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 MLPHQ9BV36 600 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-218ENST00000589294 SLC6A17Q9H1V8 727 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 KDM4CQ9H3R0 1056 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 LRRC40Q9H9A6 602 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 ARNT2Q9HBZ2 717 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 EIF2B3Q9NR50 452 aaKnown RBP12.26□□□□□ -0.45
DNMT1-218ENST00000589294 ASIC3Q9UHC3 531 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 CHKBQ9Y259 395 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 CACNA1IQ9P0X4 2223 aa12.26□□□□□ -0.45
DNMT1-218ENST00000589294 AP3B1O00203 1094 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 NDC80O14777 642 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 RAD51CO43502 376 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 AP1G1O43747 822 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 RNASEH2AO75792 299 aaKnown RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 PDHA1P08559 390 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 ADRB3P13945 408 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 HLA-DPA1P20036 260 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 TPSB2P20231 275 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 XPAP23025 273 aaPredicted RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 IVDP26440 423 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 P2RY2P41231 377 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 GRIA4P48058 902 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 LMAN1P49257 510 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 EPHB1P54762 984 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 DRG2P55039 364 aaKnown RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 SARNPP82979 210 aaKnown RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 TPSAB1Q15661 275 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 PCSK7Q16549 785 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 USP39Q53GS9 565 aaKnown RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 NAPEPLDQ6IQ20 393 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 NEK5Q6P3R8 708 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 PARS2Q7L3T8 475 aaKnown RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 WDR5BQ86VZ2 330 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 PDCD7Q8N8D1 485 aaKnown RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 IPMKQ8NFU5 416 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 NELL1Q92832 810 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 FSD1LQ9BXM9 530 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 NEUROG2Q9H2A3 272 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms