RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CD86P42081 329 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 RPL26P61254 145 aaKnown RBP19.75■□□□□ 0.75
CIRBP-220ENST00000588917 DSC2Q02487 901 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 NIPAL4Q0D2K0 466 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 PARP6Q2NL67 630 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 ARMC12Q5T9G4 340 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 CCDC70Q6NSX1 233 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 CCDC89Q8N998 374 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 SUMF1Q8NBK3 374 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 GRK7Q8WTQ7 553 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 RLN3Q8WXF3 142 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 ZNF592Q92610 1267 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 FAM131CQ96AQ9 280 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 ARRDC3Q96B67 414 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 ECHDC3Q96DC8 303 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 ZNF419Q96HQ0 510 aaPredicted RBP19.75■□□□□ 0.75
CIRBP-220ENST00000588917 RUNDC3BQ96NL0 473 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 ADGRE3Q9BY15 652 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 PCED1AQ9H1Q7 454 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 GOLGA6AQ9NYA3 693 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 FAM153AQ9UHL3 310 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 TPX2Q9ULW0 747 aaKnown RBP19.75■□□□□ 0.75
CIRBP-220ENST00000588917 PHTF1Q9UMS5 762 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 RPL26L1Q9UNX3 145 aaKnown RBP19.75■□□□□ 0.75
CIRBP-220ENST00000588917 RAI2Q9Y5P3 530 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 OTOGLQ3ZCN5 2332 aa19.75■□□□□ 0.75
CIRBP-220ENST00000588917 CACNA1AO00555 2505 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 TSPAN11A1L157 253 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 TTC24A2A3L6 582 aaPredicted RBP19.74■□□□□ 0.75
CIRBP-220ENST00000588917 CCDC188H7C350 402 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 TRAFD1O14545 582 aaPredicted RBP19.74■□□□□ 0.75
CIRBP-220ENST00000588917 FANCGO15287 622 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 PSMD3O43242 534 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 AP1G1O43747 822 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 PIGNO95427 931 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 ADRB3P13945 408 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 NFKB1P19838 968 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 CD68P34810 354 aaPredicted RBP19.74■□□□□ 0.75
CIRBP-220ENST00000588917 UGP2Q16851 508 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 POM121L1PQ3SYA9 428 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 NEK5Q6P3R8 708 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 CCDC137Q6PK04 289 aaKnown RBP19.74■□□□□ 0.75
CIRBP-220ENST00000588917 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.74■□□□□ 0.75
CIRBP-220ENST00000588917 CADM4Q8NFZ8 388 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 OR14C36Q8NHC7 312 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 VOPP1Q96AW1 172 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 RMDN1Q96DB5 314 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 TOE1Q96GM8 510 aaKnown RBP19.74■□□□□ 0.75
CIRBP-220ENST00000588917 GBA3Q9H227 469 aa19.74■□□□□ 0.75
CIRBP-220ENST00000588917 DMXL1Q9Y485 3027 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 PHF2O75151 1096 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 RHOBTB1O94844 696 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 IFNB1P01574 187 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 COILP38432 576 aaPredicted RBP19.73■□□□□ 0.75
CIRBP-220ENST00000588917 FNTAP49354 379 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 GEMP55040 296 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 SKOR1P84550 965 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 ELP6Q0PNE2 266 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 MPP3Q13368 585 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 ERAP2Q6P179 960 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 CEP68Q76N32 757 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 PRPF39Q86UA1 669 aaKnown RBP19.73■□□□□ 0.75
CIRBP-220ENST00000588917 FAM124AQ86V42 546 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 OR2T34Q8NGX1 318 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 CCDC110Q8TBZ0 833 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 PDCD6IPQ8WUM4 868 aaKnown RBP19.73■□□□□ 0.75
CIRBP-220ENST00000588917 FOXJ1Q92949 421 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 TADA1Q96BN2 335 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 IFT43Q96FT9 208 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 RBM15Q96T37 977 aaKnown RBP eCLIP19.73■□□□□ 0.75
CIRBP-220ENST00000588917 PCDH9Q9HC56 1237 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 PAK5Q9P286 719 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 PCDHB9Q9Y5E1 797 aa19.73■□□□□ 0.75
CIRBP-220ENST00000588917 GPR179Q6PRD1 2367 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3DA0A087WVF3 549 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3IA0A087WXS9 549 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3EA0A087X179 549 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3KA0A087X1G2 549 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3FA6NER0 549 aaPredicted RBP19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3LB9A6J9 549 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 HRO43593 1189 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TSPAN6O43657 245 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 PLRG1O43660 514 aaKnown RBP19.72■□□□□ 0.75
CIRBP-220ENST00000588917 GJB3O75712 270 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 URI1O94763 535 aaPredicted RBP19.72■□□□□ 0.75
CIRBP-220ENST00000588917 PGLSO95336 258 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 SEMA4FO95754 770 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 EPOP01588 193 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 MMP2P08253 660 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3HP0C7X1 549 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TIMP2P16035 220 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 METAP1P53582 386 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 EPHB1P54762 984 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 SIM2Q14190 667 aaPredicted RBP19.72■□□□□ 0.75
CIRBP-220ENST00000588917 ELF2Q15723 593 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 PIP5KL1Q5T9C9 394 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 AGBL4Q5VU57 503 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3GQ6DHY5 549 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3CQ6IPX1 549 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 PARS2Q7L3T8 475 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms