RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 HDAC8Q9BY41 377 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 MTG2Q9H4K7 406 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 XAB2Q9HCS7 855 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 PHTF1Q9UMS5 762 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 PCDHGC4Q9Y5F7 938 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 ANKRD36A6QL64 1941 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 TTC28Q96AY4 2481 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 ATG2BQ96BY7 2078 aa17.11■□□□□ 0.33
SCAMP4-211ENST00000588907 LOC285095A0A1B0GVY8 99 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 TCRBV21S2A2A0A5A6 115 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 SLC7A4O43246 635 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 FZD6O60353 706 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 PIGNO95427 931 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 APBB3O95704 486 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 CPP00450 1065 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 TUBBP07437 444 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 CTSLP07711 333 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 ACADMP11310 421 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 MLNP12872 115 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 MCM3P25205 808 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 IVDP26440 423 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 ADRA1AP35348 466 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 RPL21P46778 160 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 PSMD8P48556 350 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 GUCY2DQ02846 1103 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 TRAF2Q12933 501 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 PCSK7Q16549 785 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 RNASEH2BQ5TBB1 312 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 KIAA1211LQ6NV74 962 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 CEP128Q6ZU80 1094 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 USP30Q70CQ3 517 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 NAT8LQ8N9F0 302 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 EIF1ADQ8N9N8 165 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 PDCD6IPQ8WUM4 868 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 SIPA1Q96FS4 1042 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 KLHL32Q96NJ5 620 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 TRIB3Q96RU7 358 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 FOXP3Q9BZS1 431 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 TRIM31Q9BZY9 425 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 ARNT2Q9HBZ2 717 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 UBP1Q9NZI7 540 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 PCDHB9Q9Y5E1 797 aa17.1■□□□□ 0.33
SCAMP4-211ENST00000588907 ANTXRLA6NF34 631 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 F5H423 210 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 GJB3O75712 270 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 DCNP07585 359 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 COL9A1P20849 921 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 XPAP23025 273 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 GKP32189 559 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 CXCL12P48061 93 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 NEK3P51956 506 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 RPS14P62263 151 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 SLC7A5Q01650 507 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 CDH17Q12864 832 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 MTAPQ13126 283 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 LAMB3Q13751 1172 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 GAS6Q14393 721 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 SLC1A5Q15758 541 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 HIBCHQ6NVY1 386 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 ERAP2Q6P179 960 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 PKN3Q6P5Z2 889 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 TMEM92Q6UXU6 159 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 RANBP10Q6VN20 620 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 USP45Q70EL2 814 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 TAB3Q8N5C8 712 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 PBXIP1Q96AQ6 731 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 MRGPRX1Q96LB2 322 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 FICDQ9BVA6 458 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 MKRN2Q9H000 416 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 TSPYL1Q9H0U9 437 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 PABPC3Q9H361 631 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 HACD3Q9P035 362 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 DLGAP2Q9P1A6 1054 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 ANAPC5Q9UJX4 755 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 FZD4Q9ULV1 537 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 SNX24Q9Y343 169 aa17.09■□□□□ 0.33
SCAMP4-211ENST00000588907 A0A0C4DFX4 3053 aa17.08■□□□□ 0.33
SCAMP4-211ENST00000588907 TTC24A2A3L6 582 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 C16orf96A6NNT2 1141 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 UPK3BL1B0FP48 263 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 ANKRD66B4E2M5 251 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 BHMG1C9JSJ3 638 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 UPK3BL2E5RIL1 263 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 RHOXF2BP0C7M4 288 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 HOXA6P31267 233 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 SLC8A1P32418 973 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 ITGA8P53708 1063 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 ELP6Q0PNE2 266 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 LRRC8BQ6P9F7 803 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 FBXL19Q6PCT2 694 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 ERN2Q76MJ5 926 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 FBXL6Q8N531 539 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 DNAAF3Q8N9W5 541 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■■■■■ 50.8
SCAMP4-211ENST00000588907 VOPP1Q96AW1 172 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 RMDN1Q96DB5 314 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 OMDQ99983 421 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 RHOXF2Q9BQY4 288 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 PHACTR1Q9C0D0 580 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 DPH5Q9H2P9 285 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms