RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PDCD6IPQ8WUM4 868 aaKnown RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 MRGPRX3Q96LB0 322 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 TRIB3Q96RU7 358 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 TRIM56Q9BRZ2 755 aaKnown RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 TMEM109Q9BVC6 243 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 ROPN1BQ9BZX4 212 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 ROPN1Q9HAT0 212 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 MED4Q9NPJ6 270 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 HECAQ9UBI9 543 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-209ENST00000588857 RABGEF1Q9UJ41 708 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 SOX13Q9UN79 622 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 RPS6KL1Q9Y6S9 549 aa22.46■■□□□ 1.19
ATG4D-209ENST00000588857 FAM237BA0A1B0GVD1 139 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 TCRBV9S1A1TA0A576 114 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 PRRT4C9JH25 899 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 RASGRF2O14827 1237 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 ADRA1DP25100 572 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 RAD51Q06609 339 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 BCL2L1Q07817 233 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 MESP2Q0VG99 397 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 TRAF2Q12933 501 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 KLHL38Q2WGJ6 581 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 MYLK3Q32MK0 819 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 ARMC3Q5W041 872 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 STEAP4Q687X5 459 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 NUDT18Q6ZVK8 323 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 PTCD2Q8WV60 388 aaKnown RBP22.45■■□□□ 1.18
ATG4D-209ENST00000588857 UCMAQ8WVF2 138 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 NXPE3Q969Y0 559 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 RMDN1Q96DB5 314 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 PKNOX2Q96KN3 472 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 CENPHQ9H3R5 247 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 ACSS3Q9H6R3 686 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 ATP13A3Q9H7F0 1226 aa22.45■■□□□ 1.18
ATG4D-209ENST00000588857 TLDC2A0PJX2 215 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 SMIM23A6NLE4 172 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 ALADP13716 330 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 CRYMQ14894 314 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 PTPRNQ16849 979 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 SPANXN3Q5MJ09 141 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 PLPP6Q8IY26 295 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 PHTF2Q8N3S3 785 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 PAF1Q8N7H5 531 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 EPS8L3Q8TE67 593 aaKnown RBP22.44■■□□□ 1.18
ATG4D-209ENST00000588857 CYTH2Q99418 400 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 SH3GL2Q99962 352 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 KIFC1Q9BW19 673 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 CHRAC1Q9NRG0 131 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 LIMD1Q9UGP4 676 aa22.44■■□□□ 1.18
ATG4D-209ENST00000588857 HEATR9A2RTY3 570 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 TCEA3O75764 348 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 USP1O94782 785 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 KAT7O95251 611 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 POP4O95707 220 aaKnown RBP22.43■■□□□ 1.18
ATG4D-209ENST00000588857 SERPINA4P29622 427 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 SEPT6Q14141 434 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 LONRF1Q17RB8 773 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 ARMC12Q5T9G4 340 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 PKN3Q6P5Z2 889 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 Q6ZVU0 165 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 TMEM135Q86UB9 458 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 LPCAT1Q8NF37 534 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 ZNF669Q96BR6 464 aaPredicted RBP22.43■■□□□ 1.18
ATG4D-209ENST00000588857 TUBGCP5Q96RT8 1024 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 EPHX3Q9H6B9 360 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 PPCSQ9HAB8 311 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 PLAC1Q9HBJ0 212 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 TCAF1Q9Y4C2 921 aa22.43■■□□□ 1.18
ATG4D-209ENST00000588857 TTC34A8MYJ7 566 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 SOCS5O75159 536 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 APODP05090 189 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 PDHA1P08559 390 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 GRIA2P42262 883 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 SLCO1A2P46721 670 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 CCNHP51946 323 aaPredicted RBP22.42■■□□□ 1.18
ATG4D-209ENST00000588857 LAMB3Q13751 1172 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 GRM3Q14832 879 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 ANKRD20A4Q4UJ75 823 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 FNDC3BQ53EP0 1204 aaKnown RBP22.42■■□□□ 1.18
ATG4D-209ENST00000588857 NAIF1Q69YI7 327 aaPredicted RBP22.42■■□□□ 1.18
ATG4D-209ENST00000588857 CES3Q6UWW8 571 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 DPY19L3Q6ZPD9 716 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 CAMK1DQ8IU85 385 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.42■■□□□ 1.18
ATG4D-209ENST00000588857 MYO19Q96H55 970 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 RANBP9Q96S59 729 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 KCNK12Q9HB15 430 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 MRM3Q9HC36 420 aaKnown RBP22.42■■□□□ 1.18
ATG4D-209ENST00000588857 PCDHB9Q9Y5E1 797 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 MYO10Q9HD67 2058 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 POC1B-GALNT4F8VUJ3 575 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 PIGNO95427 931 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 SYF2O95926 243 aaKnown RBP22.42■■□□□ 1.18
ATG4D-209ENST00000588857 PRLP01236 227 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 GKP32189 559 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 EPHB1P54762 984 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 CYS1Q717R9 158 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 KDM1BQ8NB78 822 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 BLOC1S5Q8TDH9 187 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 FRS2Q8WU20 508 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms