RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TCF15Q12870 199 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 OLIG2Q13516 323 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PTPRRQ15256 657 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 WHAMMP3Q1A5X7 153 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PARP6Q2NL67 630 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 ZNF528Q3MIS6 628 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 SYCP2LQ5T4T6 812 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 USP30Q70CQ3 517 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 ZNF572Q7Z3I7 529 aaPredicted RBP10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 TTC7BQ86TV6 843 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PRSS33Q8NF86 280 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 HCAR2Q8TDS4 363 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PIH1D2Q8WWB5 315 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 TOE1Q96GM8 510 aaKnown RBP10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PPP1R16AQ96I34 528 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 TRIB3Q96RU7 358 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 KRT12Q99456 494 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 HDAC8Q9BY41 377 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 ETNK1Q9HBU6 452 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 DYRK4Q9NR20 520 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 WSB2Q9NYS7 404 aaPredicted RBP10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 DKK3Q9UBP4 350 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PCYOX1Q9UHG3 505 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 GGT7Q9UJ14 662 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 NCKAP1Q9Y2A7 1128 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PCDHB9Q9Y5E1 797 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 UPK3BL1B0FP48 263 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 UPK3BL2E5RIL1 263 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 H0Y858 1186 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 CPP00450 1065 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 AGTP01019 485 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 CTPS1P17812 591 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 CD6P30203 668 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 ACTN2P35609 894 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 VPS41P49754 854 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 NEK3P51956 506 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 TERF1P54274 439 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 ADPRHP54922 357 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 GEMP55040 296 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 LMNB2Q03252 620 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 CDK18Q07002 472 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 MPP3Q13368 585 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 GALNT3Q14435 633 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 SPARCL1Q14515 664 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 PRPSAP1Q14558 356 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 SLC14A2Q15849 920 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 UGP2Q16851 508 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 USP39Q53GS9 565 aaKnown RBP10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 CFAP58Q5T655 872 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 ARMC12Q5T9G4 340 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 KCTD11Q693B1 232 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 FBXL19Q6PCT2 694 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 BRAT1Q6PJG6 821 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 KBTBD6Q86V97 674 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 KLHDC8BQ8IXV7 354 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 ZBTB44Q8NCP5 570 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 IPMKQ8NFU5 416 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 OR14C36Q8NHC7 312 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 GRK7Q8WTQ7 553 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 FAM126AQ9BYI3 521 aaPredicted RBP10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 BTBD1Q9H0C5 482 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 PCDH9Q9HC56 1237 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 ZSCAN32Q9NX65 697 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 PAK5Q9P286 719 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 FZD4Q9ULV1 537 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 PHTF1Q9UMS5 762 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 ITM2BQ9Y287 266 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 FADS3Q9Y5Q0 445 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 PLXND1Q9Y4D7 1925 aa10.78□□□□□ -0.68
SMARCA4-213ENST00000587988 A0A0U1RQS6 177 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 LOC285095A0A1B0GVY8 99 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 FAM47DPA6NHR8 397 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 A8MX80 341 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 AREL1O15033 823 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 TTI1O43156 1089 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 PLRG1O43660 514 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 LILRB5O75023 590 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 ANXA9O76027 345 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 ECEL1O95672 775 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 ALPIP09923 528 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 ATXN1LP0C7T5 689 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 OXTRP30559 389 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 ADRA1AP35348 466 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 FDFT1P37268 417 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 CHRNA4P43681 627 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 CKAP4Q07065 602 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 GPS1Q13098 491 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 TUBB2AQ13885 445 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 QPCTQ16769 361 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 DNTTIP2Q5QJE6 756 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 ABCA7Q8IZY2 2146 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 SLC25A41Q8N5S1 370 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 DEFB119Q8N690 84 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 PAF1Q8N7H5 531 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 PDCD7Q8N8D1 485 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 LPCAT1Q8NF37 534 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 GAB3Q8WWW8 586 aa10.77□□□□□ -0.69
SMARCA4-213ENST00000587988 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms