RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 CD86P42081 329 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 RPL6Q02878 288 aaKnown RBP13.21□□□□□ -0.29
DNMT1-205ENST00000585920 NIPAL4Q0D2K0 466 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 ALG1LQ6GMV1 187 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 ITPRIPL1Q6GPH6 555 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 BRAT1Q6PJG6 821 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 PRR23BQ6ZRT6 265 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 NYAP1Q6ZVC0 841 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 FAM71DQ8N9W8 422 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 VOPP1Q96AW1 172 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 CAPZA3Q96KX2 299 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 GPR174Q9BXC1 333 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 SLC25A51Q9H1U9 297 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 PRM3Q9NNZ6 103 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 DKK3Q9UBP4 350 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 MBD1Q9UIS9 605 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-205ENST00000585920 DRG1Q9Y295 367 aaKnown RBP13.21□□□□□ -0.29
DNMT1-205ENST00000585920 RAI2Q9Y5P3 530 aa13.21□□□□□ -0.29
DNMT1-205ENST00000585920 TBC1D3DA0A087WVF3 549 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3IA0A087WXS9 549 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3EA0A087X179 549 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3KA0A087X1G2 549 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 GOLGA6L10A0A0M3HER8 536 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3FA6NER0 549 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 C5orf60A6NFR6 353 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 FAM47DPA6NHR8 397 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 LRRC72A6NJI9 287 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3LB9A6J9 549 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TRAFD1O14545 582 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 RHOBTB1O94844 696 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 SEMA4FO95754 770 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 ITGAVP06756 1048 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3HP0C7X1 549 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 ADRB3P13945 408 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TIMP2P16035 220 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 NFKB1P19838 968 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 BCKDHBP21953 392 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 CD68P34810 354 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 PAFAH1B1P43034 410 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 PRPSAP1Q14558 356 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 OASLQ15646 514 aaKnown RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 ELF2Q15723 593 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 ANKRD20A2Q5SQ80 823 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 PIP5KL1Q5T9C9 394 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 ARMC12Q5T9G4 340 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 ANKRD20A1Q5TYW2 823 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 AGBL4Q5VU57 503 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 ANKRD20A3Q5VUR7 823 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3GQ6DHY5 549 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3CQ6IPX1 549 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 DRICH1Q6PGQ1 229 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 PARS2Q7L3T8 475 aaKnown RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 LPCAT2Q7L5N7 544 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 GSTA5Q7RTV2 222 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 TBC1D3Q8IZP1 549 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 DEFB119Q8N690 84 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 PRELID2Q8N945 189 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 CCDC110Q8TBZ0 833 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 IMP4Q96G21 291 aaKnown RBP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 SPATA13Q96N96 652 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 RBM15Q96T37 977 aaKnown RBP eCLIP13.2□□□□□ -0.3
DNMT1-205ENST00000585920 SMARCAL1Q9NZC9 954 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 RNF14Q9UBS8 474 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 RSPH14Q9UHP6 348 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 RAB23Q9ULC3 237 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 PCDHB9Q9Y5E1 797 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 CKAP5Q14008 2032 aa13.2□□□□□ -0.3
DNMT1-205ENST00000585920 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 TSPAN11A1L157 253 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 KIF2AO00139 706 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-205ENST00000585920 NEMP1O14524 444 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 FANCGO15287 622 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 HTRA2O43464 458 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-205ENST00000585920 OPHN1O60890 802 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 GCATO75600 419 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 IFNB1P01574 187 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 ACTN2P35609 894 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 SUOXP51687 545 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 ADPRHP54922 357 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 SKOR1P84550 965 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 TRAF2Q12933 501 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 UGP2Q16851 508 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 PLK5Q496M5 336 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 ERAP2Q6P179 960 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 ARHGEF18Q6ZSZ5 1173 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 PRPF39Q86UA1 669 aaKnown RBP13.19□□□□□ -0.3
DNMT1-205ENST00000585920 ZSCAN30Q86W11 494 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 CREG2Q8IUH2 290 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 TMEFF1Q8IYR6 380 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 NDUFAF2Q8N183 169 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 CCDC89Q8N998 374 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 CADM4Q8NFZ8 388 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 OR2T34Q8NGX1 318 aa13.19□□□□□ -0.3
DNMT1-205ENST00000585920 ATL2Q8NHH9 583 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms