RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CCDC50Q8IVM0 306 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 RAVER1Q8IY67 606 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 DEFB119Q8N690 84 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 MFSD2AQ8NA29 543 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 OR6K2Q8NGY2 324 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 CXorf40AQ8TE69 158 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 RNF25Q96BH1 459 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 VAT1Q99536 393 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 GUCA1BQ9UMX6 200 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 PPP2R2CQ9Y2T4 447 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 PCDHGB2Q9Y5G2 931 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 HS3ST3A1Q9Y663 406 aa13.95□□□□□ -0.18
PRKCSH-202ENST00000585540 GON4LQ3T8J9 2241 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 A0A1W2PQU0 124 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 PATE3B3GLJ2 98 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 TRAFD1O14545 582 aaPredicted RBP13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 CCNB1P14635 433 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 MAOBP27338 520 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 ABL2P42684 1182 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 SCNN1BP51168 640 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 RPL26P61254 145 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 PPP2CBP62714 309 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 PPP2CAP67775 309 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 XRCC4Q13426 336 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 STAT4Q14765 748 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 AGERQ15109 404 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 ZNF284Q2VY69 593 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 POM121L1PQ3SYA9 428 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 TMEM52BQ4KMG9 183 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 BBS12Q6ZW61 710 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 USP34Q70CQ2 3546 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 NT5DC3Q86UY8 548 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 TTC13Q8NBP0 860 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 TMEM145Q8NBT3 493 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 NETO2Q8NC67 525 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 CCNYQ8ND76 341 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 KRT35Q92764 455 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 P3H4Q92791 437 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 VOPP1Q96AW1 172 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 HAUS1Q96CS2 278 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 IFT43Q96FT9 208 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 SERAC1Q96JX3 654 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 EXOC2Q96KP1 924 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 IL12RB2Q99665 862 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 ERVMER34-1Q9H9K5 563 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 LZTFL1Q9NQ48 299 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 AASDHPPTQ9NRN7 309 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 PHTF1Q9UMS5 762 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 RPL26L1Q9UNX3 145 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 ATP8A1Q9Y2Q0 1164 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 VPS13AQ96RL7 3174 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 SHROOM3Q8TF72 1996 aa13.94□□□□□ -0.18
PRKCSH-202ENST00000585540 DMDP11532 3685 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 A0A1W2PR77 199 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 GOLGA6L9A6NEM1 432 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 CST8O60676 142 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 TM7SF2O76062 418 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 TJP3O95049 919 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 PIGNO95427 931 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 FTCDO95954 541 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 CYP2A6P11509 494 aaPredicted RBP13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 SGCGQ13326 291 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 SUZ12Q15022 739 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 CCDC6Q16204 474 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 RSPO4Q2I0M5 234 aaPredicted RBP13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 INAVAQ3KP66 663 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 TCEAL6Q6IPX3 200 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 KYAT3Q6YP21 454 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 ERMP1Q7Z2K6 904 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 TP53INP2Q8IXH6 220 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 MINDY1Q8N5J2 469 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 PAF1Q8N7H5 531 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 TFB1MQ8WVM0 346 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 TCEAL3Q969E4 200 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 C1QTNF2Q9BXJ5 285 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 GDF3Q9NR23 364 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 RBM22Q9NW64 420 aaKnown RBP eCLIP13.93□□□□□ -0.185e-7■■■■□ 23.5
PRKCSH-202ENST00000585540 ANKRD6Q9Y2G4 727 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 HEY1Q9Y5J3 304 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 ANKRD36A6QL64 1941 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 TRPM6Q9BX84 2022 aa13.93□□□□□ -0.18
PRKCSH-202ENST00000585540 A6NNZ2 444 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 PSMD11O00231 422 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 PLK4O00444 970 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 CDX4O14627 284 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 CPP00450 1065 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 TIMP2P16035 220 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 CSRP1P21291 193 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 GKP32189 559 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 MMP12P39900 470 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 CTSKP43235 329 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 RABIFP47224 123 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 RGRP47804 291 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 PEX5P50542 639 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 CCT8P50990 548 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 SLC10A2Q12908 348 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 ZNF423Q2M1K9 1284 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 ARMC12Q5T9G4 340 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 USP45Q70EL2 814 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms