RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 PSMC3P17980 439 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 POLR2EP19388 210 aaKnown RBP14.1□□□□□ -0.15
UBBP4-202ENST00000584755 CA4P22748 312 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 PPP2R2AP63151 447 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 CBX1P83916 185 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 ACVR1Q04771 509 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 LAMB3Q13751 1172 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 GALNT3Q14435 633 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 KIAA0930Q6ICG6 404 aaPredicted RBP14.1□□□□□ -0.15
UBBP4-202ENST00000584755 TAOK1Q7L7X3 1001 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 CTAGE3PQ8IX95 158 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 OR2AP1Q8NGE2 309 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 BRSK1Q8TDC3 778 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 RPL10LQ96L21 214 aaKnown RBP14.1□□□□□ -0.15
UBBP4-202ENST00000584755 MRGPRX3Q96LB0 322 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 TM6SF2Q9BZW4 377 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 SENP1Q9P0U3 644 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 EPS15L1Q9UBC2 864 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 ERVW-1Q9UQF0 538 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 COLQQ9Y215 455 aaPredicted RBP14.1□□□□□ -0.15
UBBP4-202ENST00000584755 CHKBQ9Y259 395 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 PCDHGC4Q9Y5F7 938 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 ANKRD36A6QL64 1941 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 SZT2Q5T011 3432 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 IQANK1A0A1B0GTG1 560 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 TRAFD1O14545 582 aaPredicted RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 SIN3BO75182 1162 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 SRPRAP08240 638 aaKnown RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 PDHA1P08559 390 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 ERVK-10P10266 1014 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 PSMA3P25788 255 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 ARNTP27540 789 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 GBP2P32456 591 aaPredicted RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 ARCN1P48444 511 aaKnown RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 SERPINB9P50453 376 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 GYS2P54840 703 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 RPL26P61254 145 aaKnown RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 SNRPD1P62314 119 aaKnown RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 TSTD2Q5T7W7 516 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 PDPK2PQ6A1A2 396 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 ESRP1Q6NXG1 681 aaKnown RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 PARM1Q6UWI2 310 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 CNTN4Q8IWV2 1026 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 CPA6Q8N4T0 437 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 ARFGAP2Q8N6H7 521 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 FGF14Q92915 247 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 MRRFQ96E11 262 aaKnown RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 MYO19Q96H55 970 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 TUBGCP5Q96RT8 1024 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 ADGRE3Q9BY15 652 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 RPL26L1Q9UNX3 145 aaKnown RBP14.09□□□□□ -0.15
UBBP4-202ENST00000584755 IKBKGQ9Y6K9 419 aa14.09□□□□□ -0.15
UBBP4-202ENST00000584755 TRIOBPQ9H2D6 2365 aa14.08□□□□□ -0.15
UBBP4-202ENST00000584755 ANKRD66B4E2M5 251 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 WASH3PC4AMC7 463 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 ARNTLO00327 626 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 UGT1A9O60656 530 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 PGLSO95336 258 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 DLDP09622 509 aaKnown RBP14.08□□□□□ -0.16
UBBP4-202ENST00000584755 PAMP19021 973 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 CNTFP26441 200 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 RUNX3Q13761 415 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 DLG2Q15700 870 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 QPCTQ16769 361 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 PTPRNQ16849 979 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 CARD16Q5EG05 197 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 TEDDM1Q5T9Z0 273 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 MTSS1LQ765P7 747 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 KCNMB4Q86W47 210 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 PHTF2Q8N3S3 785 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 OR13J1Q8NGT2 312 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 FRS2Q8WU20 508 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 CPNE1Q99829 537 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 KXD1Q9BQD3 176 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 MCMBPQ9BTE3 642 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 CPEB1Q9BZB8 566 aaKnown RBP14.08□□□□□ -0.16
UBBP4-202ENST00000584755 TNKS2Q9H2K2 1166 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 UGT1A7Q9HAW7 530 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 UGT1A10Q9HAW8 530 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 UGT1A8Q9HAW9 530 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 ZFATQ9P243 1243 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 DEC1Q9P2X7 70 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 SLC2A6Q9UGQ3 507 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 EVLQ9UI08 416 aaPredicted RBP14.08□□□□□ -0.16
UBBP4-202ENST00000584755 SLCO3A1Q9UIG8 710 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 ADAM21Q9UKJ8 722 aa14.08□□□□□ -0.16
UBBP4-202ENST00000584755 HMX2A2RU54 273 aa14.07□□□□□ -0.16
UBBP4-202ENST00000584755 ANHXE9PGG2 379 aa14.07□□□□□ -0.16
UBBP4-202ENST00000584755 KRT37O76014 449 aa14.07□□□□□ -0.16
UBBP4-202ENST00000584755 KRT38O76015 456 aa14.07□□□□□ -0.16
UBBP4-202ENST00000584755 ATP5BP06576 529 aaKnown RBP14.07□□□□□ -0.16
UBBP4-202ENST00000584755 SNRPAP09012 282 aaKnown RBP14.07□□□□□ -0.16
UBBP4-202ENST00000584755 HPDP32754 393 aaPredicted RBP14.07□□□□□ -0.16
UBBP4-202ENST00000584755 EIF2DP41214 584 aaKnown RBP14.07□□□□□ -0.16
UBBP4-202ENST00000584755 GRIA4P48058 902 aa14.07□□□□□ -0.16
UBBP4-202ENST00000584755 SLC6A11P48066 632 aa14.07□□□□□ -0.16
UBBP4-202ENST00000584755 BCL2L1Q07817 233 aa14.07□□□□□ -0.16
UBBP4-202ENST00000584755 SEPT6Q14141 434 aa14.07□□□□□ -0.16
UBBP4-202ENST00000584755 EIF4HQ15056 248 aaKnown RBP14.07□□□□□ -0.16
UBBP4-202ENST00000584755 CNGA3Q16281 694 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms