RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 VPS36Q86VN1 386 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 PARGQ86W56 976 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 MSANTD4Q8NCY6 345 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 MAPK15Q8TD08 544 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 LMX1AQ8TE12 382 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 FAM172AQ8WUF8 416 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 EXOC2Q96KP1 924 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 KLHL32Q96NJ5 620 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 DEPDC7Q96QD5 511 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 PCDHB18PQ96TA0 734 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 LGMNQ99538 433 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 WRAP53Q9BUR4 548 aaKnown RBP8.2□□□□□ -1.1
MSI2-218ENST00000583821 STK33Q9BYT3 514 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 NOL6Q9H6R4 1146 aaKnown RBP8.2□□□□□ -1.1
MSI2-218ENST00000583821 NLRC4Q9NPP4 1024 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 FAM207AQ9NSI2 230 aaPredicted RBP8.2□□□□□ -1.1
MSI2-218ENST00000583821 TMEM248Q9NWD8 314 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 PPARGC1AQ9UBK2 798 aaKnown RBP8.2□□□□□ -1.1
MSI2-218ENST00000583821 OR12D3Q9UGF7 316 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 IPO11Q9UI26 975 aaKnown RBP8.2□□□□□ -1.1
MSI2-218ENST00000583821 COQ6Q9Y2Z9 468 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 HS3ST3A1Q9Y663 406 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 SPTA1P02549 2419 aa8.2□□□□□ -1.1
MSI2-218ENST00000583821 COL12A1Q99715 3063 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 NEMP1O14524 444 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 FPGTO14772 594 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 MUSKO15146 869 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 MMP20O60882 483 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 RAMP2O60895 175 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 PIGNO95427 931 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 GSRP00390 522 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 CYP1A1P04798 512 aaPredicted RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 PLEKP08567 350 aaPredicted RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 RHOQP17081 205 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 SDC4P31431 198 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 RFC1P35251 1148 aaPredicted RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 PTPN9P43378 593 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 RABIFP47224 123 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 MAPKAPK2P49137 400 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 PCBP4P57723 403 aaKnown RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 PFN3P60673 137 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 POLR2FP61218 127 aaKnown RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 CDR2Q01850 454 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 NRG1Q02297 640 aaPredicted RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 SLC20A2Q08357 652 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 CCDC15Q0P6D6 951 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 PTP4A2Q12974 167 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 SGCGQ13326 291 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 KRT31Q15323 416 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 MYLK3Q32MK0 819 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 ZNF805Q5CZA5 627 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 C3orf38Q5JPI3 329 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 ZCCHC8Q6NZY4 707 aaKnown RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 ZNF354CQ86Y25 554 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 SLC35F3Q8IY50 421 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 PHACTR4Q8IZ21 702 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 CACTIN-AS1Q8N1I8 211 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 FAM181AQ8N9Y4 354 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 OR2AP1Q8NGE2 309 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 TBC1D31Q96DN5 1066 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 IFT43Q96FT9 208 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 ATXN7L3BQ96GX2 97 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 HIC2Q96JB3 615 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 VCPIP1Q96JH7 1222 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 FEM1CQ96JP0 617 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 INSM2Q96T92 566 aaPredicted RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 LRRC61Q9BV99 259 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 ZMYND15Q9H091 742 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 NUP62CLQ9H1M0 184 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 SYNDIG1Q9H7V2 258 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 ASCL3Q9NQ33 180 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 MBNL1Q9NR56 388 aaKnown RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 APOBEC3BQ9UH17 382 aaKnown RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 SATB2Q9UPW6 733 aa8.19□□□□□ -1.1
MSI2-218ENST00000583821 ZFC3H1O60293 1989 aaKnown RBP8.19□□□□□ -1.1
MSI2-218ENST00000583821 H3BM21 787 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 AREL1O15033 823 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 CCP110O43303 1012 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 TSPAN6O43657 245 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 BUB1O43683 1085 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 PRKCGP05129 697 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 GP1BAP07359 652 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 KRT10P13645 584 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 GPD1P21695 349 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 EEF1GP26641 437 aaKnown RBP8.18□□□□□ -1.1
MSI2-218ENST00000583821 SOX5P35711 763 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 PDX1P52945 283 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 ADKP55263 362 aaKnown RBP8.18□□□□□ -1.1
MSI2-218ENST00000583821 POLD3Q15054 466 aaPredicted RBP8.18□□□□□ -1.1
MSI2-218ENST00000583821 IRF4Q15306 451 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 CLEC16AQ2KHT3 1053 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 ISXQ2M1V0 245 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 ARL13BQ3SXY8 428 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 PRRT3Q5FWE3 981 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 ACBD5Q5T8D3 534 aaPredicted RBP8.18□□□□□ -1.1
MSI2-218ENST00000583821 ARHGAP40Q5TG30 622 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 CDKAL1Q5VV42 579 aa8.18□□□□□ -1.1
MSI2-218ENST00000583821 KCTD16Q68DU8 428 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms