RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 GOLGA6BA6NDN3 693 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 GOLGA8MH3BSY2 632 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 PLK4O00444 970 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ATG13O75143 517 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 NDST3O95803 873 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 IL1BP01584 269 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 EPOP01588 193 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ATXN1LP0C7T5 689 aaKnown RBP9.61□□□□□ -0.87
RFFL-210ENST00000582308 GOLGA6DP0CG33 693 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 TIMP2P16035 220 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ITIH2P19823 946 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 TPSB2P20231 275 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 SERPINA4P29622 427 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 CHRNA4P43681 627 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 PSMD8P48556 350 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 LMAN1P49257 510 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 TUBB4BP68371 445 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 CDK16Q00536 496 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 SATB1Q01826 763 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 CDK18Q07002 472 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 MTAPQ13126 283 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 MORF4L2Q15014 288 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 TPSAB1Q15661 275 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 CST6Q15828 149 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ERCC6LQ2NKX8 1250 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ZNF805Q5CZA5 627 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 SIRPB2Q5JXA9 342 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ARMC12Q5T9G4 340 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ZNF776Q68DI1 518 aaPredicted RBP9.61□□□□□ -0.87
RFFL-210ENST00000582308 ZDHHC24Q6UX98 284 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ZNF534Q76KX8 674 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 PCGF5Q86SE9 256 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 DSG4Q86SJ6 1040 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 CAND1Q86VP6 1230 aaKnown RBP9.61□□□□□ -0.87
RFFL-210ENST00000582308 HOOK3Q86VS8 718 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 TMPRSS6Q8IU80 811 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 SPEM1Q8N4L4 309 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 MCUQ8NE86 351 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 OR52K1Q8NGK4 314 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 PDCD6IPQ8WUM4 868 aaKnown RBP9.61□□□□□ -0.87
RFFL-210ENST00000582308 PIH1D2Q8WWB5 315 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 UBXN4Q92575 508 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ART4Q93070 314 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ARRDC3Q96B67 414 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 IFT43Q96FT9 208 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 MRGPRX1Q96LB2 322 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 SMIM14Q96QK8 99 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 FBRSQ9HAH7 460 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 GDF3Q9NR23 364 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 GOLGA6AQ9NYA3 693 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 DKK3Q9UBP4 350 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 ARIH1Q9Y4X5 557 aaPredicted RBP9.61□□□□□ -0.87
RFFL-210ENST00000582308 PCDHB9Q9Y5E1 797 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 PLXND1Q9Y4D7 1925 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 TCRBV21S2A2A0A5A6 115 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 TSPAN11A1L157 253 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 C16orf96A6NNT2 1141 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 KPNA3O00505 521 aaPredicted RBP9.6□□□□□ -0.87
RFFL-210ENST00000582308 MID1O15344 667 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 RNASEH1O60930 286 aaKnown RBP9.6□□□□□ -0.87
RFFL-210ENST00000582308 PRKCGP05129 697 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 GABRG2P18507 467 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 NDUFV2P19404 249 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 AOC1P19801 751 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 CA4P22748 312 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 ITGB7P26010 798 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 SLC8A1P32418 973 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 CARSP49589 748 aaKnown RBP9.6□□□□□ -0.87
RFFL-210ENST00000582308 CLCN5P51795 746 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 DGKEP52429 567 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 PLTPP55058 493 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 RPL26P61254 145 aaKnown RBP9.6□□□□□ -0.87
RFFL-210ENST00000582308 MSLNQ13421 630 aaPredicted RBP9.6□□□□□ -0.87
RFFL-210ENST00000582308 GALNT3Q14435 633 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 PTPRRQ15256 657 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 SLC1A5Q15758 541 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 QPCTQ16769 361 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 PARS2Q7L3T8 475 aaKnown RBP9.6□□□□□ -0.87
RFFL-210ENST00000582308 CACUL1Q86Y37 369 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 IFT20Q8IY31 132 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 ABCA7Q8IZY2 2146 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 SLC25A41Q8N5S1 370 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 AADATQ8N5Z0 425 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 BBOF1Q8ND07 529 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 LPCAT1Q8NF37 534 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 FBXO25Q8TCJ0 367 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 HCAR2Q8TDS4 363 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 IFT81Q8WYA0 676 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 SPOCK2Q92563 424 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 PWWP2AQ96N64 755 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 FSD1LQ9BXM9 530 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 NEUROG2Q9H2A3 272 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 EPHX3Q9H6B9 360 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 ARNT2Q9HBZ2 717 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 CASS4Q9NQ75 786 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 FAM114A2Q9NRY5 505 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 ZDHHC18Q9NUE0 388 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 PIH1D1Q9NWS0 290 aaKnown RBP9.6□□□□□ -0.87
RFFL-210ENST00000582308 RPL26L1Q9UNX3 145 aaKnown RBP9.6□□□□□ -0.87
RFFL-210ENST00000582308 SHOC2Q9UQ13 582 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms