RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 FEM1CQ96JP0 617 aa9.83□□□□□ -0.84
TOP3A-211ENST00000581536 ELF4Q99607 663 aaPredicted RBP9.83□□□□□ -0.84
TOP3A-211ENST00000581536 UBA2Q9UBT2 640 aaPredicted RBP9.83□□□□□ -0.84
TOP3A-211ENST00000581536 ANGPTL2Q9UKU9 493 aa9.83□□□□□ -0.84
TOP3A-211ENST00000581536 PCDHGB2Q9Y5G2 931 aa9.83□□□□□ -0.84
TOP3A-211ENST00000581536 CXorf51AA0A1B0GTR3 108 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 POM121BA6NF01 834 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 ZSCAN5CA6NGD5 496 aaPredicted RBP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 ARHGAP42A6NI28 874 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 POM121CA8CG34 1229 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 C1QTNF9BB2RNN3 333 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 MUSKO15146 869 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 CBFA2T2O43439 604 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 PRAMEF11O60813 436 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 MMP20O60882 483 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 PRKCGP05129 697 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 FTH1P19P0C7X4 201 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 C1QTNF9P0C862 333 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 THEGLP0DJG4 465 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 SSR1P43307 286 aaKnown RBP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 HCAR3P49019 387 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 GEMIN4P57678 1058 aaKnown RBP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 TAS2R40P59535 323 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 RHOAP61586 193 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 SHC2P98077 582 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 SLC25A11Q02978 314 aaKnown RBP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 PIGHQ14442 188 aaPredicted RBP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 SUZ12Q15022 739 aaKnown RBP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 ACAP1Q15027 740 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 DPYSL2Q16555 572 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 SETMARQ53H47 684 aaPredicted RBP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 ZNF542PQ5EBM4 170 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 GCNT7Q6ZNI0 430 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 SRLQ86TD4 932 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 VPS36Q86VN1 386 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 ZSWIM9Q86XI8 627 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 CAMK1DQ8IU85 385 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 EID2Q8N6I1 236 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 OR13H1Q8NG92 308 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 BAHD1Q8TBE0 780 aaPredicted RBP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 SAP25Q8TEE9 199 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 IQCDQ96DY2 449 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 PPP1R16AQ96I34 528 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 DNAJC7Q99615 494 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 PCDH18Q9HCL0 1135 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 GDF3Q9NR23 364 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.82□□□□□ -0.84
TOP3A-211ENST00000581536 SPTLC3Q9NUV7 552 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 IP6K2Q9UHH9 426 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 KLK13Q9UKR3 277 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 DMTF1Q9Y222 760 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 PCDHB11Q9Y5F2 797 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 CHD8Q9HCK8 2581 aa9.82□□□□□ -0.84
TOP3A-211ENST00000581536 TPRP12270 2363 aaKnown RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 MYO1FO00160 1098 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 AP1G1O43747 822 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 PCDHGA12O60330 932 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 SDC3O75056 442 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 PALMO75781 387 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 IGSF6O95976 241 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 ITGAVP06756 1048 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 HNRNPA2B1P22626 353 aaKnown RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 HTR7P34969 479 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 GJC1P36383 396 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CCT8P50990 548 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 ARSEP51690 589 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 RPS21P63220 83 aaKnown RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 SLC10A7Q0GE19 358 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CCDC15Q0P6D6 951 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CBLBQ13191 982 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 TBX2Q13207 712 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 SLC18A3Q16572 532 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CCDC157Q569K6 752 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 TPRG1LQ5T0D9 272 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 Q6ZSR6 202 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 KANSL1Q7Z3B3 1105 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 RAB44Q7Z6P3 723 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 PSTKQ8IV42 348 aaKnown RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 SLC22A18ASQ8N1D0 253 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 SLC25A45Q8N413 288 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 NIPA2Q8N8Q9 360 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 TMEM145Q8NBT3 493 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 ZNF564Q8TBZ8 553 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CASKIN2Q8WXE0 1202 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 SKA1Q96BD8 255 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 LRIG1Q96JA1 1093 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 GDAP1L1Q96MZ0 367 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CSPG4P5Q96PW8 444 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 KLF6Q99612 283 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 WRAP53Q9BUR4 548 aaKnown RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CALN1Q9BXU9 219 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CPEB1Q9BZB8 566 aaKnown RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 ZMYND15Q9H091 742 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 RBSNQ9H1K0 784 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 SUV39H2Q9H5I1 410 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 NHEJ1Q9H9Q4 299 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 MBNL1Q9NR56 388 aaKnown RBP9.81□□□□□ -0.84
TOP3A-211ENST00000581536 ABHD10Q9NUJ1 306 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 KLHL11Q9NVR0 708 aa9.81□□□□□ -0.84
TOP3A-211ENST00000581536 CTTNBP2NLQ9P2B4 639 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms