RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 PSKH2Q96QS6 385 aa10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 CALN1Q9BXU9 219 aa10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 SUV39H2Q9H5I1 410 aa10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 PCDH18Q9HCL0 1135 aa10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 IPO11Q9UI26 975 aaKnown RBP10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 ANAPC7Q9UJX3 599 aa10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 U3KQA8 63 aa10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 SMG1Q96Q15 3661 aaKnown RBP10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 SCN8AQ9UQD0 1980 aa10.7□□□□□ -0.7
SUPT4H1-204ENST00000580947 KALRNO60229 2985 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 H3BRJ5 948 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 TRAFD1O14545 582 aaPredicted RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 SIGLEC6O43699 453 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 MMP20O60882 483 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 CD48P09326 243 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 NME1P15531 152 aaKnown RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 CR2P20023 1033 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 MMP12P39900 470 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 SUOXP51687 545 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 NSUN2Q08J23 767 aaKnown RBP eCLIP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 SLC10A7Q0GE19 358 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 RALGDSQ12967 914 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 EIF2B5Q13144 721 aaKnown RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 ZNF211Q13398 564 aaPredicted RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 RFTN1Q14699 578 aaPredicted RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 AGERQ15109 404 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 UGP2Q16851 508 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 CCDC122Q5T0U0 273 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 DHRS13Q6UX07 377 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 PTAR1Q7Z6K3 402 aaPredicted RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 SRLQ86TD4 932 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 TTC7BQ86TV6 843 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 VPS36Q86VN1 386 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 DCP2Q8IU60 420 aaKnown RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 VSTM4Q8IW00 320 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 PGBD5Q8N414 524 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 LZTR1Q8N653 840 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 OR4C6Q8NH72 309 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 ZCCHC14Q8WYQ9 949 aaKnown RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 ZNF641Q96N77 438 aaPredicted RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 TUBGCP5Q96RT8 1024 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 PACSIN1Q9BY11 444 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 ZWILCHQ9H900 591 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 PCDH12Q9NPG4 1184 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 MBNL1Q9NR56 388 aaKnown RBP10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 IP6K2Q9UHH9 426 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 CACNA1GO43497 2377 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 ATMQ13315 3056 aa10.69□□□□□ -0.7
SUPT4H1-204ENST00000580947 FAM149AA5PLN7 773 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 SRRM3A6NNA2 597 aaPredicted RBP10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 DFFAO00273 331 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 FPGTO14772 594 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 DAPK3O43293 454 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 MAFKO60675 156 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 RFPL3O75679 317 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 PALMO75781 387 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 CSF2P04141 144 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 C1SP09871 688 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 CKMT2P17540 419 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 GM2AP17900 193 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 ACP1P24666 158 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 RABIFP47224 123 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 CLDN6P56747 220 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 RAD51Q06609 339 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 SGCGQ13326 291 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 GRM3Q14832 879 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 SLC18A3Q16572 532 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 ZNF542PQ5EBM4 170 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 TMCO4Q5TGY1 634 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 SPECC1LQ69YQ0 1117 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 BRAT1Q6PJG6 821 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 PARGQ86W56 976 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 PROSER1Q86XN7 944 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 ZNF548Q8NEK5 533 aaPredicted RBP10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 ZNF564Q8TBZ8 553 aaPredicted RBP10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 RFFLQ8WZ73 363 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 HSPH1Q92598 858 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 ZNF599Q96NL3 588 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 WRAP53Q9BUR4 548 aaKnown RBP10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 SP110Q9HB58 689 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 RCOR3Q9P2K3 495 aaPredicted RBP10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 DKK4Q9UBT3 224 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.68□□□□□ -0.76e-6■□□□□ 9.8
SUPT4H1-204ENST00000580947 CFAP46Q8IYW2 2715 aa10.68□□□□□ -0.7
SUPT4H1-204ENST00000580947 SSU72P8A0A1W2PR75 194 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 TTC24A2A3L6 582 aaPredicted RBP10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 NEMP1O14524 444 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 SCAMP1O15126 338 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 HTRA2O43464 458 aaPredicted RBP10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 TM7SF2O76062 418 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 PROSCO94903 275 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 PRKCGP05129 697 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 C6P13671 934 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 ARL4AP40617 200 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 TAS2R40P59535 323 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 SEMG2Q02383 582 aa10.67□□□□□ -0.7
SUPT4H1-204ENST00000580947 ELP6Q0PNE2 266 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms