RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, human

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DHX40-208	ENST00000580218	PTPRR	Q15256	657 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	UGP2	Q16851	508 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	ZFYVE27	Q5T4F4	411 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	SYCP2L	Q5T4T6	812 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	KAZN	Q674X7	775 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	TIGD7	Q6NT04	549 aa	Predicted RBP	13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	NEK5	Q6P3R8	708 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	GCNT7	Q6ZNI0	430 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	PEX26	Q7Z412	305 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	RGL4	Q8IZJ4	473 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	SNX19	Q92543	992 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	RAB7B	Q96AH8	199 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	HAUS1	Q96CS2	278 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	RMDN1	Q96DB5	314 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	SMIM14	Q96QK8	99 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	GORASP1	Q9BQQ3	440 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	C1QTNF2	Q9BXJ5	285 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	OSBPL8	Q9BZF1	889 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	TSGA10	Q9BZW7	698 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	CAAP1	Q9H8G2	361 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	FZD3	Q9NPG1	666 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	PCDH12	Q9NPG4	1184 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	DLL3	Q9NYJ7	618 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	AMACR	Q9UHK6	382 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	GUCA1B	Q9UMX6	200 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	SLC6A14	Q9UN76	642 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	EFR3B	Q9Y2G0	817 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	PCDHGC4	Q9Y5F7	938 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	SPTBN2	O15020	2390 aa		13.54	□□□□□ -0.24
DHX40-208	ENST00000580218	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3D	A0A087WVF3	549 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3I	A0A087WXS9	549 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3E	A0A087X179	549 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3K	A0A087X1G2	549 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218		A0A1B0GVT2	93 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	MIF4GD	A9UHW6	222 aa	Known RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3L	B9A6J9	549 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218		H0Y8X5	98 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	RIOK3	O14730	519 aa	Known RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	KHNYN	O15037	678 aa	Known RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	SOCS5	O75159	536 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	CFI	P05156	583 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	PDHA1	P08559	390 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3H	P0C7X1	549 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	ZFX	P17010	805 aa	Predicted RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	SERPINA4	P29622	427 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	CD68	P34810	354 aa	Predicted RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	NR2C2	P49116	596 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	CSNK1E	P49674	416 aa	Known RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	RENBP	P51606	427 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	RWDD2B	P57060	319 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	RACK1	P63244	317 aa	Known RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	SEMG2	Q02383	582 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TFDP2	Q14188	446 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	GRM3	Q14832	879 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TMEM52B	Q4KMG9	183 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	RALGPS1	Q5JS13	557 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	MEI1	Q5TIA1	1274 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3G	Q6DHY5	549 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3C	Q6IPX1	549 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	NAPEPLD	Q6IQ20	393 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	FBXL19	Q6PCT2	694 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	BRAT1	Q6PJG6	821 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	PRPF39	Q86UA1	669 aa	Known RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	REXO1L1P	Q8IX06	675 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	CEP76	Q8TAP6	659 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	KLK6	Q92876	244 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	ZNF830	Q96NB3	372 aa	Predicted RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	SEMA3C	Q99985	751 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	TDRD1	Q9BXT4	1180 aa	Known RBP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	MIR1-1HG	Q9H1L0	117 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	ATP13A3	Q9H7F0	1226 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	IL21R	Q9HBE5	538 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	LZTFL1	Q9NQ48	299 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	DYRK4	Q9NR20	520 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	SUSD2	Q9UGT4	822 aa		13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
DHX40-208	ENST00000580218	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.52	□□□□□ -0.24
DHX40-208	ENST00000580218	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	ARHGAP33	O14559	1287 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	TSPAN6	O43657	245 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	KRT86	O43790	486 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	PGLS	O95336	258 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	JCHAIN	P01591	159 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	LHCGR	P22888	699 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	PTPN3	P26045	913 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	CTSK	P43235	329 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	MAPK8	P45983	427 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	AFF3	P51826	1226 aa	Known RBP	13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	NAP1L1	P55209	391 aa	Known RBP	13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	SKOR1	P84550	965 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	OTUD4	Q01804	1114 aa	Known RBP	13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	PDK1	Q15118	436 aa		13.52	□□□□□ -0.25
DHX40-208	ENST00000580218	SHB	Q15464	509 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms