RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 TRIM55Q9BYV6 548 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 RABGEF1Q9UJ41 708 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 RAB26Q9ULW5 256 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 ERGIC3Q9Y282 383 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 AP4B1Q9Y6B7 739 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 SF3B1O75533 1304 aaKnown RBP eCLIP10.16□□□□□ -0.78
RTTN-202ENST00000578780 H3BNX3 289 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 J3QRK9 145 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 TNFRSF10BO14763 440 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 TYROBPO43914 113 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 ESRRBO95718 433 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 CRYZL1O95825 349 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 F9P00740 461 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 FGFR3P22607 806 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 CA4P22748 312 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 ADRA1BP35368 520 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 ALDH1A3P47895 512 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 CLK3P49761 638 aaKnown RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 HNRNPFP52597 415 aaKnown RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 NRLP54845 237 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 ARPP19P56211 112 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 GBE1Q04446 702 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 SELENBP1Q13228 472 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 MRPL58Q14197 206 aaKnown RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 MORF4L2Q15014 288 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 PKN2Q16513 984 aaKnown RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 RGS21Q2M5E4 152 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 RNASEH2BQ5TBB1 312 aaKnown RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 C1orf53Q5VUE5 145 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 FUT10Q6P4F1 479 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 LVRNQ6Q4G3 990 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 CYP2U1Q7Z449 544 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 PCGF5Q86SE9 256 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 ZCCHC9Q8N567 271 aaKnown RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 TAB3Q8N5C8 712 aaPredicted RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 RNF139Q8WU17 664 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 FBXL8Q96CD0 374 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 PGAP3Q96FM1 320 aaPredicted RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 ZNF512Q96ME7 567 aaPredicted RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 PSD2Q9BQI7 771 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 TMEM175Q9BSA9 504 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 RNF38Q9H0F5 515 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 WDR6Q9NNW5 1121 aaKnown RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 TMEM39AQ9NV64 488 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 HACD3Q9P035 362 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 RCOR3Q9P2K3 495 aaPredicted RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 FBXW11Q9UKB1 542 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 CDH7Q9ULB5 785 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 SMG5Q9UPR3 1016 aaKnown RBP10.16□□□□□ -0.78
RTTN-202ENST00000578780 SATB2Q9UPW6 733 aa10.16□□□□□ -0.78
RTTN-202ENST00000578780 SCN5AQ14524 2016 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 TET1Q8NFU7 2136 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 KCNN4O15554 427 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 ICMTO60725 284 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 DLDP09622 509 aaKnown RBP10.15□□□□□ -0.78
RTTN-202ENST00000578780 RAG1P15918 1043 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 NR4A1P22736 598 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 RBL1P28749 1068 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 ETV3P41162 512 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 NR2C2P49116 596 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 AIF1P55008 147 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 SLC10A2Q12908 348 aaPredicted RBP10.15□□□□□ -0.78
RTTN-202ENST00000578780 IKBKEQ14164 716 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 STAT4Q14765 748 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 PDK1Q15118 436 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 DDR2Q16832 855 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 DNAL1Q4LDG9 190 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 SDHAF4Q5VUM1 108 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 NCBP2-AS2Q69YL0 99 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 ALYREFQ86V81 257 aaKnown RBP10.15□□□□□ -0.78
RTTN-202ENST00000578780 GPR180Q86V85 440 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 TMEM173Q86WV6 379 aaPredicted RBP10.15□□□□□ -0.78
RTTN-202ENST00000578780 LSMEM1Q8N8F7 131 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 TSPAN14Q8NG11 270 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 GRIN3AQ8TCU5 1115 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 LRRN4Q8WUT4 740 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 NTAN1Q96AB6 310 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 FUBP3Q96I24 572 aaKnown RBP eCLIP10.15□□□□□ -0.78
RTTN-202ENST00000578780 OLFM1Q99784 485 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 TRIM62Q9BVG3 475 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 FOXP3Q9BZS1 431 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 KLHL25Q9H0H3 589 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 Q9H521 79 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 PALMDQ9NP74 551 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 ANLNQ9NQW6 1124 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 TBX21Q9UL17 535 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 ARIH1Q9Y4X5 557 aaPredicted RBP10.15□□□□□ -0.78
RTTN-202ENST00000578780 PCDHB5Q9Y5E4 795 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 CORINQ9Y5Q5 1042 aa10.15□□□□□ -0.78
RTTN-202ENST00000578780 BCLAF3A2AJT9 711 aaKnown RBP10.15□□□□□ -0.79
RTTN-202ENST00000578780 OR6C75A6NL08 312 aa10.15□□□□□ -0.79
RTTN-202ENST00000578780 PSMD12O00232 456 aaPredicted RBP10.15□□□□□ -0.79
RTTN-202ENST00000578780 CLOCKO15516 846 aa10.15□□□□□ -0.79
RTTN-202ENST00000578780 SORBS2O94875 1100 aaKnown RBP10.15□□□□□ -0.79
RTTN-202ENST00000578780 BMXP51813 675 aa10.15□□□□□ -0.79
RTTN-202ENST00000578780 KDSRQ06136 332 aa10.15□□□□□ -0.79
RTTN-202ENST00000578780 TAC4Q86UU9 113 aa10.15□□□□□ -0.79
RTTN-202ENST00000578780 PPIL6Q8IXY8 311 aa10.15□□□□□ -0.79
RTTN-202ENST00000578780 CCDC33Q8N5R6 958 aa10.15□□□□□ -0.79
RTTN-202ENST00000578780 TRIML2Q8N7C3 387 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms