RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 SPOCK3Q9BQ16 436 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 SNRNP25Q9BV90 132 aaKnown RBP7.16□□□□□ -1.26
CASC3-205ENST00000577605 NUP85Q9BW27 656 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 CPEB1Q9BZB8 566 aaKnown RBP7.16□□□□□ -1.26
CASC3-205ENST00000577605 TRIM5Q9C035 493 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 MIR1-1HGQ9H1L0 117 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 C6orf106Q9H6K1 298 aaPredicted RBP7.16□□□□□ -1.26
CASC3-205ENST00000577605 LRRC19Q9H756 370 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 ERVMER34-1Q9H9K5 563 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 DKK3Q9UBP4 350 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 PCSK1NQ9UHG2 260 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 EIF2B4Q9UI10 523 aaKnown RBP7.16□□□□□ -1.26
CASC3-205ENST00000577605 ANAPC7Q9UJX3 599 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 NENFQ9UMX5 172 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 NEU3Q9UQ49 428 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 SNX10Q9Y5X0 201 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 MYH10P35580 1976 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 F5P12259 2224 aa7.16□□□□□ -1.26
CASC3-205ENST00000577605 ESYT3A0FGR9 886 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 A6NHS1 94 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ZNF487B1APH4 448 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 PATE3B3GLJ2 98 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 KPNA3O00505 521 aaPredicted RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 SMAD6O43541 496 aaKnown RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 PRAMEF11O60813 436 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 MFAP3LO75121 409 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 TRIM16O95361 564 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 CD160O95971 181 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 IGHV4-34P06331 123 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ERCC2P18074 760 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ACVRL1P37023 503 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 HSPA9P38646 679 aaKnown RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 SLC1A1P43005 524 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 DNA2P51530 1060 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 CCNHP51946 323 aaPredicted RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 C21orf59P57076 290 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 RHOAP61586 193 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 POLR2LP62875 67 aaKnown RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 RPS21P63220 83 aaKnown RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 IL10RBQ08334 325 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 CNTN1Q12860 1018 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 TBX2Q13207 712 aaPredicted RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 STAT4Q14765 748 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 RAB6CQ53S08 254 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ZNF805Q5CZA5 627 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 RALGPS1Q5JS13 557 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 AGBL4Q5VU57 503 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 AFMIDQ63HM1 303 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 NAPEPLDQ6IQ20 393 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 KIAA1161Q6NSJ0 714 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 NCEH1Q6PIU2 408 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 TMCO3Q6UWJ1 677 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 LINGO4Q6UY18 593 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 GDPD4Q6W3E5 623 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 DPY19L3Q6ZPD9 716 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 POLNQ7Z5Q5 900 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ADAT2Q7Z6V5 191 aaKnown RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 DNAAF5Q86Y56 855 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 TREML1Q86YW5 311 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 PYROXD2Q8N2H3 581 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 TXLNBQ8N3L3 684 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 MINDY1Q8N5J2 469 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 DEFB119Q8N690 84 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ARFGAP1Q8N6T3 406 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 RNF214Q8ND24 703 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ZNF564Q8TBZ8 553 aaPredicted RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 FAM71BQ8TC56 605 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 NSMCE1Q8WV22 266 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 SNX19Q92543 992 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ERLEC1Q96DZ1 483 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 ZNF641Q96N77 438 aaPredicted RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 GTPBP2Q9BX10 602 aaKnown RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 C1QTNF7Q9BXJ2 289 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 RAB6CQ9H0N0 254 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 MTG2Q9H4K7 406 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 NHEJ1Q9H9Q4 299 aaPredicted RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 TM9SF3Q9HD45 589 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 CTTNBP2NLQ9P2B4 639 aa7.15□□□□□ -1.26
CASC3-205ENST00000577605 HECAQ9UBI9 543 aaPredicted RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 UBA2Q9UBT2 640 aaPredicted RBP7.15□□□□□ -1.26
CASC3-205ENST00000577605 FAM170AA1A519 330 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 DCDC2BA2VCK2 349 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 CFAP69A5D8W1 941 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 FAM47DPA6NHR8 397 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 K7ERQ8 282 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 FLRT2O43155 660 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 BNIP3LO60238 219 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 PCDHGA12O60330 932 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 ZNF821O75541 412 aaPredicted RBP7.14□□□□□ -1.27
CASC3-205ENST00000577605 LEFTY1O75610 366 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 MTA2O94776 668 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 TMCC1O94876 653 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 PROSCO94903 275 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 KCNK5O95279 499 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 IPO7O95373 1038 aaKnown RBP7.14□□□□□ -1.27
CASC3-205ENST00000577605 RARAP10276 462 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 CDK4P11802 303 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 ADRB3P13945 408 aa7.14□□□□□ -1.27
CASC3-205ENST00000577605 VAV1P15498 845 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms